Table 2.
Rank of pathogenic genes in each OS approach.
| Methods | 1% | 5% | 10% | 20% | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| G1 | G2 | G1-2 | G1 | G2 | G1-2 | G1 | G2 | G1-2 | G1 | G2 | G1-2 | |
| BioGraph | - | - | - | - | 3.5 | 3.5 | 7 | 6 | 6.3 | 9.5 | 7.3 | 8 |
| CIPHER | 2 | 7 | 4.5 | 2 | 7 | 4.5 | 41.3 | 43 | 32.8 | 58 | 59 | 57.7 |
| DisGeNET | 5.3 | 4.2 | 4.7 | 12.1 | 10 | 11.1 | 23.9 | 23.6 | 25.2 | 31.6 | 31.4 | 33.7 |
| Genie | 17 | 14.6 | 16.5 | 44 | 41.6 | 42.6 | 88.2 | 75 | 91.3 | 148.5 | 113.2 | 151.9 |
| GLAD4U | - | 1 | 1 | 4 | 4.2 | 4 | 8.6 | 6.6 | 8.2 | 13.3 | 10.2 | 13 |
| GUILDify | 15.8 | 8.3 | 16.7 | 42.6 | 8.3 | 43.3 | 366.5 | 536.4 | 491.2 | 873.8 | 973.9 | 972.1 |
| Phenolizer | 44.3 | 28 | 36.4 | 150.4 | 120.9 | 148 | 200.9 | 120.9 | 182.5 | 477.5 | 429.2 | 513.2 |
| PolySearch | - | - | - | 2 | 2 | 2 | 2 | 2.5 | 2.5 | 2 | 2.5 | 2.5 |
| SNPs3D | 1.5 | 1.5 | 1.5 | 1.5 | 6.4 | 4 | 17.8 | 10.9 | 14.4 | 27.1 | 16.2 | 21.6 |
| Consensus | 54.5 | 41.6 | 49.3 | 126.1 | 108.2 | 128 | 152.9 | 131.2 | 157.7 | 241.4 | 174.7 | 239.3 |