Table 1. Externally validated CA2-enriched proteins.
Here, we list expression (mRNA and protein) and known function of proteins that we found to have robustly enriched expression in CA2 (vs. CA1). These 18 proteins have been previously shown in the literature to be enriched in CA2 through examination of mRNA and/or protein expression and provide external validation of the methods used to isolate and analyze areas CA1 and CA2 for this study.
Gene Symbol | Protein name | Validation by mRNA | Validation by Protein | Known Function in neurons |
---|---|---|---|---|
DGKG | Diacylglycerol kinase gamma | Yes71 | N/A | N/A |
MCU | Mitochondrial Calcium Uniporter | Yes71 | N/A | Main component of the protein complex that mediates mitochondrial calcium uptake56 |
NECAB2 | N-terminal EF-hand calcium-binding protein 2 | Yes45 | Yes45 | Interacts with and modulates the activity of the adenosine 2A receptor72 and metabotropic glutamate receptor 573 |
ACTN2 | Alpha-actinin 2 | N/A | Yes11, 42 | Mediates spine morphology and assembly of the post-synaptic density in hippocampal neurons,52 anchoring PSD-95 at post-synaptic sites53 |
SMS | Spermine synthase | Yes71 | N/A | Converts spermidine to spermine, a polyamine which has multiple effects54 including modulation of NMDA receptor function55 |
PRKCE | Protein kinase C ε | N/A | Yes74 | Activation and increased expression of this kinase mediates neuroprotection following oxygen and glucose deprivation62 |
SLC25A22 | Mitochondrial glutamate carrier 1 | Yes71 | N/A | Transports glutamate into the inner mitochondrial membrane75 |
RGS14 | Regulator of G protein signaling 14 | Yes71 | Yes6–8 | Natural suppressor of LTP in the CA2 region of the hippocampus6 through modulation of calcium signaling43· 44 |
OSTF1 | Osteoclast-stimulating factor 1 | Yes71 | Yes76 | N/A |
CADPS | Calcium-dependent secretion activator 1 | Yes71 | N/A | Essential factor for synaptic vesicle priming in hippocampal neurons60 |
GPC1 | Glypican-1 | Yes71 | N/A | N/A |
PPFIA2 | Liprin-alpha 2 | No77 | Yes78 | Controls synaptic output by regulating synaptic vesicle pool size59 |
KCTD4 | Potassium channel tetramerization domain containing 4 | Yes71 | N/A | N/A |
RYR2 | Ryanodine receptor 2 | No71 | Yes79· 80 | Mediates calcium-induced calcium release from intracellular calcium stores57, affecting cognitive function and hippocampal synaptic plasticity in chronically stressed mice81 |
ATP8A1 | ATPase phospholipid transporting 8A1 | Yes71 | N/A | Deficiency in this flippase is associated with externalization of phosphatidylserine in hippocampal neurons, delaying hippocampal-dependent learning63 |
NRP1 | Neuropilin 1 | Yes71 | N/A | Interacts with semaphoring 3 and VEGF to mediate axon guidance and angiogenesis respectively58 |
ANXA11 | Annexin A11 | Yes71 | N/A | Participates in ER-to-Golgi trafficking, modulating the early secretory pathway82 |
CLVS2 | Clavesin 2 | Yes71 | N/A | Regulates late endosome/lysosome morphology83 |