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. 2020 Feb 19;11:115. doi: 10.3389/fphys.2020.00115

TABLE 2.

Summary of clean reads mapped to the reference genome of mouse.

Sample Raw date read Base Valid date read Base Valid% read Q20% Q30% GC%
CD6A-1 58748442 8.81G 48364460 7.25G 82.32 99.20 96.44 49.00
CD6A-2 59452796 8.92G 48959376 7.34G 82.35 99.52 97.21 51.00
CD6A-3 58563520 8.79G 48696972 7.30G 83.15 99.13 95.98 49.00
FBD6-1 59970362 9.00G 57652548 8.64G 96.14 99.39 97.09 50.00
FBD6-2 57907066 8.69G 56827140 8.52G 98.14 99.57 95.75 50.00
FBD6-3 56905122 8.54G 54152732 8.12G 95.16 99.22 96.17 49.00
FAD6-1 65608270 9.84G 57597380 8.64G 87.79 99.55 96.49 50.00
FAD6-2 64061528 9.65G 55865012 8.38G 87.21 99.15 95.86 51.00
FAD6-3 66241238 9.94G 58153066 8.72G 87.79 99.63 97.94 50.00
CD6B-1 56804874 8.52G 49590640 7.44G 87.30 99.66 97.93 49.00
CD6B-2 57290458 8.59G 50295274 7.54G 87.79 99.38 96.92 49.00
CD6B-3 57516602 9.63G 50243946 7.54G 87.36 99.62 97.31 50.00
CD8-1 51722480 7.76G 51153928 7.67G 98.90 99.68 96.19 50.00
CD8-2 54269660 8.14G 53547754 8.03G 98.67 99.69 97.05 49.50
CD8-3 48768472 7.32G 48078448 7.21G 98.59 99.69 96.90 49.00
FID8-1 44641116 6.70G 43937778 6.59G 98.42 99.69 96.97 50.00
FID8-2 53513324 8.03G 52647430 7.90G 98.38 99.65 96.94 50.00
FID8-3 49853240 7.48G 48944858 7.34G 98.18 99.75 97.42 49.50