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. Author manuscript; available in PMC: 2020 Dec 1.
Published in final edited form as: Med Phys. 2019 Oct 31;46(12):5612–5622. doi: 10.1002/mp.13854

Table 1:

Step-by-step algorithm describing the procedure for segmenting OAR structures of the head and neck for an incoming target CT scan using the Structured Weighted Voting (SWV) and Global Weighted Voting (GWV) atlas fusion techniques using CT-radiodensity image similarity or MIND descriptor.

INPUT: Unseen target CT scan, Multi-atlas set with CT images and expert delineations of OARs
OUTPUT: Segmented CT scan with OAR segmentations and consensus map
Step 1: Deformably register all atlases to the target scan by using Plastimatch
Step 2: Propagate atlas labels to the target scan
Step 3: Calculate atlas similarity matrix using either CT-radiodensity or MIND descriptor image feature in Eq. 2
Step 4: Calculate weights and dynamically select top-ranked atlases using Eq. 3
  IF fusion method == SWV THEN
   Set τ = 0.5
  ELSE IF fusion method == GWV THEN
   Set τ = 0.8
Step 5: Fuse propagated atlas labels using Eq. 1 to produce the consensus map
Step 6: Extract segmentations using default consensus threshold = 33