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. 2020 Feb 25;30(8):2567–2580.e6. doi: 10.1016/j.celrep.2020.01.105
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and Virus Strains

AAV.Syn.Flex.GCaMP6s.WPRE.SV40
Penn Vector Core
Chen et al., 2013
RRID: Addgene_100845;
Addgene viral prep # 100845-AAV1

Chemicals, Peptides, and Recombinant Proteins

Alexa Fluor 488 hydrazide, sodium salt Thermo Fisher Scientific Cat# A10436

Experimental Models: Organisms/Strains

Mouse: B6;C3-Tg(Scnn1a-cre)3Aibs/J The Jackson Laboratory RRID:IMSR_JAX:009613
Mouse: B6;129S6-Gt(ROSA)26Sortm14(CAG-TdTomato)Hze/J The Jackson Laboratory RRID:IMSR_JAX:007908

Software and Algorithms

MATLAB R2017b Mathworks RRID:SCR_001622; URL: https://www.mathworks.com/products/matlab/
Origin(Pro) 2018 64bit OriginLab RRID:SCR_014212; URL: http://www.originlab.com/index.aspx?go=PRODUCTS/Origin
ImageJ (version 1.52e) Fiji, Schindelin et al., 2012 RRID:SCR_002285; URL: http://fiji.sc
NoRMCorre Pnevmatikakis and Giovannucci, 2017 URL: https://github.com/flatironinstitute/NoRMCorre
CaImAn Giovannucci et al., 2019 URL: https://github.com/flatironinstitute/CaImAn-MATLAB
FluoroSNNAP Patel et al., 2015 URL: https://www.seas.upenn.edu/∼molneuro/software.html
Traveling Salesman Problem - Genetic Algorithm version 1.3.0.0 (9.62 KB) by Joseph Kirk MATLAB Central File Exchange 2017 URL: https://www.mathworks.com/matlabcentral/fileexchange/13680-traveling-salesman-problem-genetic-algorithm
HOPS (Heuristically optimal path scanning) Sadovsky et al., 2011 URL: http://macleanlab.uchicago.edu/software/
pClamp 10 (version 10.4) Software Suite Molecular Devices RRID:SCR_011323URL: https://www.moleculardevices.com

Other

Kwik-Cast World Precision Instruments Cat# KWIK-CAST
MultiClamp 700B amplifier Molecular Devices URL: https://www.moleculardevices.com
Axon Digidata 1440A Molecular Devices URL: https://www.moleculardevices.com