REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Bacterial and Virus Strains | ||
AAV.Syn.Flex.GCaMP6s.WPRE.SV40 |
Penn Vector Core Chen et al., 2013 |
RRID: Addgene_100845; |
Addgene viral prep # 100845-AAV1 | ||
Chemicals, Peptides, and Recombinant Proteins | ||
Alexa Fluor 488 hydrazide, sodium salt | Thermo Fisher Scientific | Cat# A10436 |
Experimental Models: Organisms/Strains | ||
Mouse: B6;C3-Tg(Scnn1a-cre)3Aibs/J | The Jackson Laboratory | RRID:IMSR_JAX:009613 |
Mouse: B6;129S6-Gt(ROSA)26Sortm14(CAG-TdTomato)Hze/J | The Jackson Laboratory | RRID:IMSR_JAX:007908 |
Software and Algorithms | ||
MATLAB R2017b | Mathworks | RRID:SCR_001622; URL: https://www.mathworks.com/products/matlab/ |
Origin(Pro) 2018 64bit | OriginLab | RRID:SCR_014212; URL: http://www.originlab.com/index.aspx?go=PRODUCTS/Origin |
ImageJ (version 1.52e) | Fiji, Schindelin et al., 2012 | RRID:SCR_002285; URL: http://fiji.sc |
NoRMCorre | Pnevmatikakis and Giovannucci, 2017 | URL: https://github.com/flatironinstitute/NoRMCorre |
CaImAn | Giovannucci et al., 2019 | URL: https://github.com/flatironinstitute/CaImAn-MATLAB |
FluoroSNNAP | Patel et al., 2015 | URL: https://www.seas.upenn.edu/∼molneuro/software.html |
Traveling Salesman Problem - Genetic Algorithm version 1.3.0.0 (9.62 KB) by Joseph Kirk | MATLAB Central File Exchange 2017 | URL: https://www.mathworks.com/matlabcentral/fileexchange/13680-traveling-salesman-problem-genetic-algorithm |
HOPS (Heuristically optimal path scanning) | Sadovsky et al., 2011 | URL: http://macleanlab.uchicago.edu/software/ |
pClamp 10 (version 10.4) Software Suite | Molecular Devices | RRID:SCR_011323URL: https://www.moleculardevices.com |
Other | ||
Kwik-Cast | World Precision Instruments | Cat# KWIK-CAST |
MultiClamp 700B amplifier | Molecular Devices | URL: https://www.moleculardevices.com |
Axon Digidata 1440A | Molecular Devices | URL: https://www.moleculardevices.com |