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. 2020 Jan 22;96(3):fiaa010. doi: 10.1093/femsec/fiaa010

Table 2.

The total number of nifH sequences, OTUs (binned at 95% similarity) and sequence distribution between cyanobacteria and heterotroph lineages (calculated as a % of total sequences) for samples collected in 2014 from Taylor Valley. Chao–Shen index estimated the number of additional OTUs generated by obtaining an additional 250 sequences.

Sample ID Total sequences OTUs Cyanobacteria (%) Heterotrophs (%) Chao–Shen index
1.1 768 23 0.26 99.7 2.229
1.2 618 19 21.5 78.5 1.254
2.1 19826 67 49.2 50.8 0.050
2.2 2731 26 89.0 11.0 0.819
3.1 7408 33 90.9 9.1 0.130
3.2 6308 25 93.5 6.5 0.272
7.1 555 13 73.3 26.7 2.052
7.2 19463 24 51.2 48.8 0.025
8.1 9013 25 99.1 0.89 0.082
8.2 13939 17 99.8 0.20 0.053
9.1 2091 20 99.2 0.76 0.675
9.2 258 13 90.4 9.6 Failed
10.1 4253 38 70.4 29.6 0.113
10.2 4300 26 57.6 42.4 0.168
11.1 1020 13 99.6 0.39 0.635
11.2 3104 17 98.5 1.48 0.150
12.1 561 14 98.6 1.43 2.045
12.2 41121 26 99.96 0.041 0.012