Table 2.
Gene | Genetic marker(s) | Type of study | Physiologic function | Studied population | Type of polymorphism | Reference |
---|---|---|---|---|---|---|
DENND1A | rs2479106 | Case control | Clathrin-mediated endocytosis | Caucasian | rs2479106 G | (61) |
DENND1A | rs10818854 rs2479106 rs10986105 |
Meta-analysis | Clathrin-mediated endocytosis | Asian and European | rs10818854 rs10986105 |
(62) |
DENND1A | rs2479106 rs10818854 |
Meta-analysis | Clathrin-mediated endocytosis | Chinese Han | rs10818854 | (63) |
DENND1A | rs10818854 rs2479106 rs10986105 |
Retrospective case-control study. | Clathrin-mediated endocytosis | Tunisian | 0818854 rs10986105 |
(64) |
AQP8 | rs7198838 rs1076973 rs1076974 rs2287797 rs2287798 rs2287796 |
case control | Water channel protein | Chinese Han | rs2287798 | (65) |
YAP1 | rs11225138 rs11225161 rs1122516 |
Replication study | Transcriptional regulator | Chinese Han | rs11225161 (A/G) | (66) |
TNF | rs1799964 rs1799724 |
Family association | Pro-inflammatory cytokine | Chinese Han | rs1799964 | (67) |
TGF-β1 | rs4803457C/T rs11466313 deletion/AGG rs2217130C/T rs1800469C/T rs1800470C/T |
GWAS | Low-grade chronic inflammation | Chinese Han | rs4803457C/T | (68) |
TNFα
IL-6 IL-10 |
−308 G/A −174 G/C −1082 G/A |
case-control | Inflammatory cytokines | Turkish | IL-6 promoter region polymorphism | (60) |
TNFRSF1B | M196R (676 T→G) variant in exon 6 | GWAS | TNF signaling | Spanish Italian |
M196R (676 T→G) | (69) |
IL-6 | -174 G/C | Case- control | Inflammatory cytokine | Indian | −174 G/C SNP | (70) |
TNFα
IL-6 |
(−308 G/A), (−174 G/C) |
meta-analysis | Chronic low-grade inflammation | Different populations | No association | (71) |
DENND1A: DENN domain containing 1A; AQP8: Aquaporin 8; YAP1: yeast associated protein 1; TNF: Tumor necrosis factor; TGF-β1: transforming growth factor β1; TNFRSF1B: TNF receptor 2