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. 2019 Dec;22(12):1378–1386. doi: 10.22038/IJBMS.2019.14029

Table 2.

Candidate genes involved in etiology of polycystic ovary syndrome related to cell proliferation and signaling and chronic inflammation

Gene Genetic marker(s) Type of study Physiologic function Studied population Type of polymorphism Reference
DENND1A rs2479106 Case control Clathrin-mediated endocytosis Caucasian rs2479106 G (61)
DENND1A rs10818854
rs2479106
rs10986105
Meta-analysis Clathrin-mediated endocytosis Asian and European rs10818854
rs10986105
(62)
DENND1A rs2479106
rs10818854
Meta-analysis Clathrin-mediated endocytosis Chinese Han rs10818854 (63)
DENND1A rs10818854
rs2479106
rs10986105
Retrospective case-control study. Clathrin-mediated endocytosis Tunisian 0818854
rs10986105
(64)
AQP8 rs7198838
rs1076973
rs1076974
rs2287797
rs2287798
rs2287796
case control Water channel protein Chinese Han rs2287798 (65)
YAP1 rs11225138
rs11225161
rs1122516
Replication study Transcriptional regulator Chinese Han rs11225161 (A/G) (66)
TNF rs1799964
rs1799724
Family association Pro-inflammatory cytokine Chinese Han rs1799964 (67)
TGF-β1 rs4803457C/T
rs11466313
deletion/AGG
rs2217130C/T
rs1800469C/T
rs1800470C/T
GWAS Low-grade chronic inflammation Chinese Han rs4803457C/T (68)
TNFα
IL-6
IL-10
−308 G/A
−174 G/C
−1082 G/A
case-control Inflammatory cytokines Turkish IL-6 promoter region polymorphism (60)
TNFRSF1B M196R (676 T→G) variant in exon 6 GWAS TNF signaling Spanish
Italian
M196R (676 T→G) (69)
IL-6 -174 G/C Case- control Inflammatory cytokine Indian −174 G/C SNP (70)
TNFα
IL-6
(−308 G/A),
(−174 G/C)
meta-analysis Chronic low-grade inflammation Different populations No association (71)

DENND1A: DENN domain containing 1A; AQP8: Aquaporin 8; YAP1: yeast associated protein 1; TNF: Tumor necrosis factor; TGF-β1: transforming growth factor β1; TNFRSF1B: TNF receptor 2