Table 2.
Publicly-available datasets utilized for analysis
| Project | Dataset | Reference (or link) |
|---|---|---|
| Angiogenesis | MsigDB (Broad Institute) | http://software.broadinstitute.org/gsea/index.jsp |
| Angiogenesis |
PubAngioGen (East China Normal University) |
http://www.megabionet.org/aspd Li et al. [76] |
| Angiogenesis |
AngioDB (Pusan National University) |
Sohn et al. [77] |
| Angiogenesis |
dbANGIO (Memorial University of Newfoundland) |
Savas et al. [78] |
| Isoform Analysis | ICGC (US Donors) | https://xenabrowser.net/datapages/ |
| Isoform Analysis | TCGA breast cancer (BRCA) | https://portal.gdc.cancer.gov/projects/TCGA-BRCA |
| Isoform Analysis | TCGA BRCA grade information | Budczies et al. [27] |
| Isoform Analysis | GTEx (Genotype Tissue Expression) | https://xenabrowser.net/transcripts/ |