Table 2.
Oligonucleotide | Alkylation step | 9a | 9b | R 9b/9a | 10a | 10b | Crosslinking efficiency |
---|---|---|---|---|---|---|---|
11 (GpC) | first | 0.54 (±0.04) | 0.98 (±0.04) | 1.8 (±0.07) | ND | ND | NA |
second | 0.31 (±0.2) | 1.20 (±0.6) | 4.2 (±0.6) | ND | 0.60 (±0.4) | 33% | |
12 (GpC) | first | 0.50 (±0.02) | 1.52 (±0.07) | 3.10 (±0.04) | ND | ND | NA |
second | 0.12 (±0.02) | 0.80 (±0.02) | 6.90 (±1) | ND | 0.40 (±0.09) | 33% | |
13 (CpG) | first | 0.92 (±0.2) | 0.19 (±0.04) | 0.21 (±0.06) | ND | ND | NA |
second | 0.11 (±0.02) | 0.13 (±0.01) | 1.13 (±0.3) | 0.50 (±0.2) | ND | 82% | |
14 (CpG) | first | 1.1 (±0.07) | 0.88 (±0.08) | 0.8 (±0.07) | ND | ND | NA |
second | 0.14 (±0.001) | 0.70 (±0.03) | 4.90 (±0.2) | 0.76 (±0.01) | ND | 84% |