Table 2.
Subfamily | Tribe | Scientific name* | NCBI accession (nrDNA) | NCBI accession (Plastome) | Life style | Length (bp) |
LSC (bp) |
SSC (bp) |
IR (bp) |
GC % | # of coding genes |
# of pseudo- genes |
# of tRNAs |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Epidendroideae | Arethuseae | Bletilla ochracea | – | NC029483 | Terrestrial | 157,431 | 85,810 | 17,949 | 26,836 | 37.3 | 74 | 9 | 30 |
Epidendroideae | Arethuseae | Bletilla striata | – | NC028422 | Terrestrial | 157,393 | 86,213 | 17,742 | 26,719 | 37.2 | 74 | 9 | 29 |
Epidendroideae | Arethuseae | Pleione bulbocodioides | – | NC036342 | Terrestrial | 159,269 | 87,121 | 18,712 | 26,718 | 37.2 | 83 | 0 | 30 |
Epidendroideae | Collabieae | Calanthe aristulifera | MN221390 | MN200378 | Terrestrial | 158,204 | 86,889 | 18,369 | 26,473 | 36.7 | 83 | 0 | 30 |
Epidendroideae | Collabieae | Calanthe bicolor | MN221391 | MN200379 | Terrestrial | 158,070 | 87,000 | 18,342 | 26,364 | 36.7 | 83 | 0 | 30 |
Epidendroideae | Collabieae | Calanthe davidii | – | NC037438 | Terrestrial | 153,629 | 86,045 | 15,672 | 25,956 | 36.9 | 83 | 0 | 30 |
Epidendroideae | Collabieae | Calanthe triplicata | – | NC024544 | Terrestrial | 158,759 | 87,305 | 18,460 | 26,497 | 36.7 | 83 | 0 | 30 |
Epidendroideae | Cymbidieae | Cymbidium goeringii | – | NC028524 | Terrestrial | 157,192 | 85,749 | 17,883 | 26,780 | 36.9 | 74 | 9 | 30 |
Epidendroideae | Cymbidieae | Cymbidium lancifolium | – | NC029712 | Terrestrial | 149,945 | 84,716 | 13,895 | 25,667 | 37.1 | 73 | 8 | 30 |
Epidendroideae | Cymbidieae | Cymbidium macrorhizon | MK333261 | KY354040 | Terrestrial | 149,859 | 85,187 | 13,766 | 25,453 | 37.0 | 73 | 8 | 30 |
Epidendroideae | Cymbidieae | Dipodium roseum | MN221399 | MN200386 | Terrestrial | 141,209 | 81,787 | 10,352 | 24,535 | 36.9 | 71 | 3 | 30 |
Epidendroideae | Cymbidieae | Erycina pusilla | – | NC018114 | Epiphyte | 143,164 | 83,733 | 11,675 | 23,878 | 36.7 | 71 | 6 | 29 |
Epidendroideae | Cymbidieae | Eulophia zollingeri | – | NC037212 | Terrestrial | 145,201 | 81,566 | 13,091 | 25,272 | 36.9 | 73 | 6 | 29 |
Epidendroideae | Cymbidieae | Oncidium sphacelatum | – | NC028148 | Epiphyte | 147,761 | 83,575 | 12,670 | 25,758 | 37.1 | 73 | 4 | 30 |
Epidendroideae | Epidendreae | Calypso bulbosa var. occidentalis | – | NC040980 | Terrestrial | 149,313 | 83,331 | 14,718 | 25,632 | 37.1 | 72 | 8 | 29 |
Epidendroideae | Epidendreae | Cattleya crispata | – | NC026568 | Epiphyte | 148,343 | 85,973 | 13,261 | 24,495 | 37.3 | 75 | 7 | 30 |
Epidendroideae | Epidendreae | Cattleya liliputana | – | NC032083 | Epiphyte | 147,092 | 85,945 | 13,149 | 24,304 | 37.4 | 75 | 7 | 30 |
Epidendroideae | Epidendreae | Corallorhiza bulbosa | – | NC025659 | Terrestrial | 148,643 | 82,851 | 12,368 | 26,712 | 37.1 | 72 | 7 | 29 |
Epidendroideae | Epidendreae | Corallorhiza macrantha | – | NC025660 | Terrestrial | 151,031 | 84,263 | 12,544 | 27,112 | 37.2 | 70 | 9 | 29 |
Epidendroideae | Epidendreae | Corallorhiza maculata var. maculata 1 | MN221392 | MN200380 | Terrestrial | 146,198 | 79,612 | 13,018 | 26,784 | 36.8 | 53 | 22 | 30 |
Epidendroideae | Epidendreae | Corallorhiza maculata var. maculata 2 | – | KM390014 | Terrestrial | 146,886 | 80,395 | 12,885 | 26,803 | 36.8 | 55 | 25 | 29 |
Epidendroideae | Epidendreae | Corallorhiza maculata var. mexicana | – | KM390015 | Terrestrial | 151,506 | 84,347 | 12,671 | 27,244 | 37.1 | 71 | 8 | 29 |
Epidendroideae | Epidendreae | Corallorhiza maculata var. occidentalis | – | KM390016 | Terrestrial | 146,595 | 81,363 | 12,368 | 26,432 | 36.9 | 58 | 22 | 30 |
Epidendroideae | Epidendreae | Corallorhiza mertensiana | – | NC025661 | Terrestrial | 147,941 | 81,109 | 13,774 | 26,529 | 36.8 | 58 | 22 | 29 |
Epidendroideae | Epidendreae | Corallorhiza odontorhiza | – | NC025664 | Terrestrial | 147,317 | 82,257 | 13,508 | 25,776 | 37.0 | 71 | 8 | 29 |
Epidendroideae | Epidendreae | Corallorhiza striata var. vreelandii | – | JX087681 | Terrestrial | 137,505 | 72,631 | 12,388 | 26,243 | 36.4 | 46 | 30 | 29 |
Epidendroideae | Epidendreae | Corallorhiza trifida | – | NC025662 | Terrestrial | 149,384 | 83,092 | 14,420 | 25,936 | 37.2 | 72 | 9 | 29 |
Epidendroideae | Epidendreae | Corallorhiza wisteriana | – | NC025663 | Terrestrial | 146,437 | 76,350 | 17,743 | 26,172 | 37.1 | 71 | 8 | 29 |
Epidendroideae | Epidendreae | Cremastra appendiculata | – | NC037439 | Terrestrial | 155,320 | 87,098 | 15,478 | 26,372 | 37.2 | 76 | 5 | 30 |
Epidendroideae | Epidendreae | Cremastra unguiculata | MN221393 | MN200381 | Terrestrial | 159,341 | 87,031 | 18,252 | 27,029 | 36.9 | 82 | 0 | 30 |
Epidendroideae | Epidendreae | Hexalectris warnockii | – | MH444822 | Terrestrial | 119,057 | 66,903 | 17,490 | 17,332 | 36.9 | 41 | 26 | 29 |
Epidendroideae | Epidendreae | Masdevallia coccinea | – | NC026541 | Terrestrial | 157,423 | 84,957 | 18,448 | 27,009 | 36.8 | 83 | 0 | 30 |
Epidendroideae | Epidendreae | Masdevallia picturata | – | NC026777 | Epiphyte | 156,045 | 84,948 | 18,029 | 26,534 | 36.9 | 83 | 0 | 29 |
Epidendroideae | Epidendreae | Oreorchis patens | MN221415 | MN200369 | Terrestrial | 158,542 | 86,437 | 18,443 | 26,831 | 36.9 | 83 | 0 | 30 |
Epidendroideae | Gastrodieae | Gastrodia elata 2 | – | NC037409 | Terrestrial | 35,304 | (SC Only) | (SC Only) | - | 34.2 | 23 | 2 | 5 |
Epidendroideae | Gastrodieae | Gastrodia elata 1 | MN221402 | MN200389 | Terrestrial | 35,056 | (SC Only) | (SC Only) | - | 26.7 | 23 | 2 | 5 |
Epidendroideae | Malaxideae | Bulbophyllum inconspicuum | MN221389 | MN200377 | Epiphyte | 149,548 | 85,760 | 12,136 | 25,826 | 37.0 | 78 | 0 | 30 |
Epidendroideae | Malaxideae | Dendrobium moniliforme 2 | – | NC035154 | Epiphyte | 148,778 | 84,867 | 11,945 | 25,983 | 37.5 | 70 | 5 | 30 |
Epidendroideae | Malaxideae | Dendrobium moniliforme 1 | MN221396 | MN200384 | Epiphyte | 151,711 | 84,773 | 14,352 | 26,293 | 37.5 | 73 | 7 | 30 |
Epidendroideae | Malaxideae | Dendrobium moniliforme ‘Royal Dream' | MN221397 | MN200385 | Epiphyte | 151,695 | 84,758 | 14,351 | 26,293 | 37.5 | 73 | 7 | 30 |
Epidendroideae | Malaxideae | Dendrobium moniliforme ‘Sangeum' | MN221398 | MN200383 | Epiphyte | 151,711 | 84,773 | 14,352 | 26,293 | 37.5 | 73 | 7 | 30 |
Epidendroideae | Malaxideae | Dendrobium nobile | – | NC029456 | Epiphyte | 153,660 | 85,686 | 14,654 | 26,660 | 37.5 | 73 | 7 | 30 |
Epidendroideae | Malaxideae | Dendrobium officinale | – | NC024019 | Epiphyte | 152,221 | 85,109 | 14,516 | 26,298 | 37.5 | 73 | 7 | 30 |
Epidendroideae | Malaxideae | Liparis auriculata | MN221412 | MN200365 | Terrestrial | 153,460 | 83,785 | 17,731 | 25,972 | 36.9 | 83 | 0 | 30 |
Epidendroideae | Malaxideae | Liparis loeselii | - | MF374688 | Terrestrial | 153,687 | 84,596 | 17,673 | 25,709 | 36.9 | 74 | 9 | 29 |
Epidendroideae | Malaxideae | Liparis makinoana | MN221413 | MN200368 | Terrestrial | 153,093 | 83,533 | 17,746 | 25,907 | 36.9 | 83 | 0 | 30 |
Epidendroideae | Malaxideae | Oberonia japonica | MN221414 | NC035832 | Epiphyte | 142,996 | 81,669 | 10,969 | 25,179 | 37.4 | 72 | 2 | 30 |
Epidendroideae | Neottieae | Aphyllorchis montana | – | NC030703 | Terrestrial | 94,559 | (SC Only) | (SC Only) | - | 37.1 | 38 | 26 | 30 |
Epidendroideae | Neottieae | Cephalanthera humilis | – | NC030706 | Terrestrial | 157,011 | 86,908 | 15,133 | 27,485 | 37.3 | 71 | 10 | 30 |
Epidendroideae | Neottieae | Cephalanthera longifolia | – | NC030704 | Terrestrial | 161,877 | 88,806 | 19,187 | 26,942 | 37.2 | 83 | 0 | 30 |
Epidendroideae | Neottieae | Epipactis mairei | – | NC030705 | Terrestrial | 159,019 | 86,377 | 18,816 | 26,913 | 37.3 | 81 | 2 | 30 |
Epidendroideae | Neottieae | Epipactis thunbergii | MN221400 | MN200387 | Terrestrial | 159,279 | 87,297 | 18,638 | 26,672 | 37.3 | 83 | 0 | 30 |
Epidendroideae | Neottieae | Epipactis veratrifolia | – | NC030708 | Terrestrial | 159,719 | 87,043 | 18,854 | 26,911 | 37.3 | 82 | 1 | 30 |
Epidendroideae | Neottieae | Limodorum abortivum | – | MH590355 | Terrestrial | 154,847 | 85,544 | 15,099 | 27,102 | 37.5 | 76 | 0 | 30 |
Epidendroideae | Neottieae | Neottia acuminata | – | NC030709 | Terrestrial | 83,190 | 51,145 | 5,371 | 13,337 | 36.6 | 31 | 20 | 30 |
Epidendroideae | Neottieae | Neottia camtschatea | – | NC030707 | Terrestrial | 106,385 | 52,960 | 9,273 | 22,076 | 37.2 | 38 | 29 | 30 |
Epidendroideae | Neottieae | Neottia fugongensis | – | NC030711 | Terrestrial | 156,536 | 85,357 | 18,311 | 26,434 | 31.6 | 83 | 0 | 30 |
Epidendroideae | Neottieae | Neottia listeroides | – | NC030713 | Terrestrial | 110,246 | 45,021 | 9,597 | 27,814 | 37.2 | 31 | 25 | 30 |
Epidendroideae | Neottieae | Neottia nidus-avis | – | NC016471 | Terrestrial | 92,060 | 36,422 | 7,822 | 23,908 | 34.4 | 29 | 8 | 27 |
Epidendroideae | Neottieae | Neottia ovata | – | NC030712 | Terrestrial | 156,978 | 85,433 | 18,071 | 26,737 | 37.6 | 83 | 0 | 30 |
Epidendroideae | Neottieae | Neottia pinetorum | – | NC030710 | Terrestrial | 155,959 | 84,449 | 18,104 | 26,703 | 37.5 | 82 | 1 | 30 |
Epidendroideae | Neottieae | Palmorchis pabstii | – | NC041190 | Terrestrial | 163,909 | 90,710 | 18,823 | 27,188 | 37.3 | 83 | 0 | 30 |
Epidendroideae | Nervilieae | Epipogium aphyllum | – | NC026449 | Terrestrial | 30,650 | 8,030 | 0 | 11,310 | 32.8 | 21 | 0 | 6 |
Epidendroideae | Nervilieae | Epipogium roseum | – | NC026448 | Terrestrial | 19,047 | 9,618 | 8,907 | 261 | 30.6 | 22 | 0 | 7 |
Epidendroideae | Sobralieae | Elleanthus sodiroi | – | NC027266 | Terrestrial | 161,511 | 88,425 | 18,880 | 27,103 | 37.1 | 83 | 0 | 30 |
Epidendroideae | Sobralieae | Sobralia aff. bouchei HTK-2015 | – | NC028209 | Terrestrial/Epiphyte | 161,543 | 88,684 | 18,835 | 27,012 | 37.1 | 83 | 0 | 30 |
Epidendroideae | Sobralieae | Sobralia callosa | – | NC028147 | Terrestrial | 161,430 | 88,666 | 18,794 | 26,985 | 37.1 | 83 | 0 | 30 |
Epidendroideae | Vandeae | Gastrochilus fuscopunctatus | MK317970 | NC035830 | Epiphyte | 146,183 | 83,125 | 11,146 | 25,956 | 36.8 | 72 | 2 | 30 |
Epidendroideae | Vandeae | Gastrochilus japonicus | MK317969 | NC035833 | Epiphyte | 147,697 | 84,695 | 11,174 | 25,914 | 36.8 | 72 | 2 | 30 |
Epidendroideae | Vandeae | Holcoglossum amesianum | – | NC041511 | Epiphyte | 148,074 | 84,250 | 12,026 | 25,899 | 36.6 | 72 | 4 | 30 |
Epidendroideae | Vandeae | Holcoglossum flavescens | – | NC041512 | Epiphyte | 146,863 | 83,288 | 11,959 | 25,808 | 36.7 | 72 | 4 | 30 |
Epidendroideae | Vandeae | Holcoglossum lingulatum | – | NC041465 | Epiphyte | 146,525 | 83,762 | 11,274 | 25,769 | 36.8 | 72 | 6 | 30 |
Epidendroideae | Vandeae | Neofinetia falcata | MK317968 | KT726909 | Epiphyte | 146,491 | 83,802 | 11,775 | 25,457 | 36.6 | 72 | 4 | 30 |
Epidendroideae | Vandeae | Neofinetia falcata ‘CheongSan' | MK317971 | NC036372 | Epiphyte | 146,497 | 83,808 | 11,775 | 25,457 | 36.6 | 72 | 4 | 30 |
Epidendroideae | Vandeae | Neofinetia richardsiana | MK317967 | NC036373 | Epiphyte | 146,498 | 83,809 | 11,775 | 25,457 | 36.6 | 72 | 4 | 30 |
Epidendroideae | Vandeae | Pelatantheria scolopendrifolia | MK317972 | NC035829 | Epiphyte | 146,860 | 86,075 | 11,735 | 24,525 | 36.5 | 72 | 1 | 30 |
Epidendroideae | Vandeae | Pendulorchis himalaica | – | NC041513 | Epiphyte | 145,207 | 83,712 | 11,413 | 25,041 | 36.6 | 72 | 4 | 30 |
Epidendroideae | Vandeae | Phalaenopsis aphrodite subsp. formosana | – | NC007499 | Epiphyte | 148,964 | 85,957 | 11,543 | 25,732 | 36.7 | 71 | 3 | 30 |
Epidendroideae | Vandeae | Phalaenopsis equestris | – | NC017609 | Epiphyte | 148,959 | 85,967 | 11,300 | 25,846 | 36.7 | 71 | 8 | 30 |
Epidendroideae | Vandeae | Phalaenopsis ‘Tiny Star' | – | NC025593 | Epiphyte | 148,918 | 85,885 | 11,523 | 25,755 | 36.7 | 71 | 7 | 31 |
Epidendroideae | Vandeae | Sedirea japonica | MN221419 | MN200373 | Epiphyte | 146,942 | 84,882 | 10,568 | 25,746 | 32.2 | 72 | 2 | 30 |
Epidendroideae | Vandeae | Thrixspermum japonicum | MK317966 | NC035831 | Epiphyte | 149,220 | 85,301 | 11,546 | 26,187 | 36.1 | 71 | 1 | 30 |
Epidendroideae | Vandeae | Vanda brunnea | – | NC041522 | Epiphyte | 149,216 | 85,783 | 11,713 | 25,860 | 36.7 | 72 | 7 | 30 |
Orchidoideae | Cranichideae | Anoectochilus emeiensis | – | NC033895 | Terrestrial | 152,650 | 82,670 | 17,342 | 26,319 | 36.9 | 80 | 0 | 31 |
Orchidoideae | Cranichideae | Goodyera fumata | – | NC026773 | Terrestrial | 155,643 | 84,077 | 18,342 | 26,612 | 37.3 | 83 | 0 | 30 |
Orchidoideae | Cranichideae | Goodyera procera | – | NC029363 | Terrestrial | 153,240 | 82,032 | 18,406 | 26,401 | 37.6 | 76 | 0 | 31 |
Orchidoideae | Cranichideae | Goodyera rosulacea | MN221403 | MN200390 | Terrestrial | 152,831 | 82,041 | 17,720 | 26,535 | 36.8 | 83 | 0 | 30 |
Orchidoideae | Cranichideae | Goodyera schlechtendaliana | – | NC029364 | Terrestrial | 154,348 | 83,215 | 18,051 | 26,541 | 37.2 | 79 | 0 | 31 |
Orchidoideae | Cranichideae | Goodyera velutina | – | NC029365 | Terrestrial | 152,692 | 82,443 | 17,247 | 26,501 | 36.9 | 76 | 0 | 31 |
Orchidoideae | Cranichideae | Hetaeria shikokiana | MN221408 | MN200367 | Terrestrial | 130,934 | 64,694 | 2,320 | 31,960 | 36.3 | 44 | 19 | 30 |
Orchidoideae | Cranichideae | Kuhlhasseltia nakaiana | MN221409 | KY354041 | Terrestrial | 147,614 | 81,617 | 13,673 | 26,162 | 39.5 | 73 | 0 | 30 |
Orchidoideae | Cranichideae | Ludisia discolor | – | NC030540 | Terrestrial | 153,054 | 82,675 | 17,233 | 26,573 | 37.0 | 82 | 0 | 30 |
Orchidoideae | Diurideae | Rhizanthella gardneri | – | NC014874 | Terrestrial | 59,190 | 26,360 | 13,295 | 9,767 | 34.2 | 24 | 4 | 9 |
Orchidoideae | Orchideae | Amitostigma gracile | MN221388 | MN200376 | Terrestrial | 156,120 | 85,171 | 18,165 | 26,392 | 36.4 | 83 | 0 | 30 |
Orchidoideae | Orchideae | Dactylorhiza viridis var. coreana | MN221395 | MN200382 | Terrestrial | 153,549 | 82,715 | 17,728 | 26,553 | 31.9 | 83 | 0 | 30 |
Orchidoideae | Orchideae | Galearis cyclochila | MN221401 | MN200388 | Terrestrial | 153,928 | 83,308 | 17,772 | 26,424 | 36.9 | 83 | 0 | 30 |
Orchidoideae | Orchideae | Gymnadenia conopsea | MN221404 | MN200391 | Terrestrial | 153,876 | 83,142 | 17,702 | 26,516 | 38.6 | 83 | 0 | 29 |
Orchidoideae | Orchideae | Habenaria chejuensis | MN221405 | MN200392 | Terrestrial | 153,896 | 83,732 | 17,026 | 26,569 | 36.6 | 82 | 0 | 30 |
Orchidoideae | Orchideae | Habenaria flagellifera | MN221406 | MN200366 | Terrestrial | 151,210 | 81,072 | 17,110 | 26,514 | 36.7 | 83 | 0 | 30 |
Orchidoideae | Orchideae | Habenaria pantlingiana | – | NC026775 | Terrestrial | 153,951 | 83,641 | 17,370 | 26,470 | 36.6 | 83 | 0 | 30 |
Orchidoideae | Orchideae | Habenaria radiata | MN221407 | NC035834 | Terrestrial | 155,353 | 84,833 | 17,718 | 26,401 | 36.5 | 83 | 0 | 30 |
Orchidoideae | Orchideae | Ophrys fusca subsp. iricolor | – | AP018716 | Terrestrial | 150,177 | 80,541 | 16,940 | 26,348 | 36.8 | 83 | 0 | 22 |
Orchidoideae | Orchideae | Ophrys sphegodes | – | AP018717 | Terrestrial | 146,754 | 80,471 | 16,177 | 25,053 | 36.9 | 83 | 0 | 22 |
Orchidoideae | Orchideae | Platanthera japonica | – | NC037440 | Terrestrial | 154,995 | 85,979 | 13,664 | 27,676 | 37.0 | 82 | 0 | 30 |
Orchidoideae | Orchideae | Platanthera mandarinorum | MN221416 | MN200370 | Terrestrial | 154,162 | 83,325 | 17,757 | 26,540 | 36.8 | 83 | 0 | 30 |
Cypripedioideae | Cypripedioideae | Cypripedium formosanum | – | NC026772 | Terrestrial | 178,131 | 102,188 | 21,921 | 27,011 | 33.9 | 83 | 0 | 31 |
Cypripedioideae | Cypripedioideae | Cypripedium japonicum | – | NC027227 | Terrestrial | 174,417 | 97,322 | 21,911 | 27,592 | 34.5 | 82 | 1 | 30 |
Cypripedioideae | Cypripedioideae | Paphiopedilum armeniacum | – | NC026779 | Terrestrial | 162,682 | 91,734 | 3,666 | 33,641 | 35.4 | 72 | 5 | 30 |
Cypripedioideae | Cypripedioideae | Paphiopedilum dianthum | – | NC036958 | Epiphyte | 154,699 | 86,861 | 2,416 | 32,711 | 35.9 | 71 | 3 | 30 |
Cypripedioideae | Cypripedioideae | Paphiopedilum niveum | – | NC026776 | Terrestrial | 159,108 | 89,856 | 5,194 | 32,029 | 35.7 | 71 | 5 | 30 |
Cypripedioideae | Cypripedioideae | Phragmipedium longifolium | – | NC028149 | Terrestrial | 151,157 | 88,367 | 13,066 | 24,862 | 36.1 | 71 | 4 | 30 |
Vanilloideae | Pogonieae | Pogonia japonica | MN221417 | MN200371 | Terrestrial | 158,200 | 87,447 | 5,387 | 32,683 | 36.4 | 72 | 4 | 30 |
Vanilloideae | Pogonieae | Pogonia minor | MN221418 | MN200372 | Terrestrial | 158,170 | 87,457 | 5,375 | 32,669 | 36.4 | 72 | 4 | 30 |
Vanilloideae | Vanilleae | Cyrtosia septentrionalis | MN221394 | MH615835 | Terrestrial | 96,859 | 58,085 | 10,414 | 17,946 | 34.8 | 41 | 0 | 25 |
Vanilloideae | Vanilleae | Lecanorchis japonica | MN221410 | MN200364 | Terrestrial | 70,498 | 28,197 | 14,493 | 13,904 | 30.4 | 25 | 3 | 7 |
Vanilloideae | Vanilleae | Lecanorchis kiusiana | MN221411 | MN200363 | Terrestrial | 74,084 | 30,824 | 14,118 | 14,571 | 30.0 | 25 | 2 | 8 |
Vanilloideae | Vanilleae | Vanilla aphylla | – | NC035320 | Epiphyte | 150,184 | 87,379 | 2,131 | 30,337 | 35.0 | 65 | 7 | 29 |
Vanilloideae | Vanilleae | Vanilla madagascariensis | MN221420 | MN200374 | Epiphyte | 151,552 | 87,490 | 1,254 | 31,404 | 34.6 | 71 | 1 | 29 |
Vanilloideae | Vanilleae | Vanilla planifolia 2 | – | NC026778 | Epiphyte | 148,011 | 86,358 | 2,037 | 29,808 | 35.4 | 72 | 1 | 30 |
Vanilloideae | Vanilleae | Vanilla planifolia 1 | MN221421 | MN200375 | Epiphyte | 147,714 | 86,061 | 2,037 | 29,808 | 35.4 | 72 | 1 | 30 |
Vanilloideae | Vanilleae | Vanilla pompona | – | NC036809 | Epiphyte | 148,009 | 86,358 | 2,037 | 29,807 | 35.4 | 72 | 1 | 30 |
Apostasioideae | Apostasioideae | Apostasia odorata | – | NC030722 | Terrestrial | 159,285 | 86,172 | 18,765 | 27,174 | 35.7 | 82 | 1 | 30 |
Apostasioideae | Apostasioideae | Apostasia wallichii | – | NC036260 | Terrestrial | 156,126 | 83,031 | 20,187 | 26,454 | 36.1 | 73 | 10 | 30 |
Apostasioideae | Apostasioideae | Neuwiedia zollingeri var. singapureana | – | LC199503 | Terrestrial | 161,068 | 88,910 | 18,056 | 27,051 | 36.0 | 73 | 10 | 29 |
Amarylidaceae (Outgroup) | Amarylidaceae (Outgroup) | Allium cepa | – | KM088013 | Terrestrial | 153,529 | 82,662 | 17,931 | 26,468 | 36.8 | 82 | 0 | 30 |
Asparagaceae (Outgroup) | Asparagaceae (Outgroup) | Eustrephus latifolius | – | NC025305 | Terrestrial | 159,736 | 82,403 | 13,607 | 31,863 | 38.1 | 78 | 2 | 30 |
Iridaceae (Outgroup) | Iridaceae (Outgroup) | Iris gatesii | – | NC024936 | Terrestrial | 153,441 | 82,702 | 18,371 | 26,184 | 37.9 | 83 | 0 | 29 |
Iridaceae (Outgroup) | Iridaceae (Outgroup) | Iris sanguinea | – | NC029227 | Terrestrial | 152,408 | 82,340 | 18,016 | 26,026 | 38.0 | 83 | 0 | 30 |
Liliales (Outgroup) | Liliales (Outgroup) | Fritillaria hupehensis | – | NC024736 | Terrestrial | 152,145 | 81,894 | 17,553 | 26,349 | 37.0 | 80 | 2 | 30 |
*Red scientific name indicates that the species is mixotroph or obligate (full) mycoheterotroph throughout its life cycle. The bold NCBI accession numbers for nrDNAs and plastomes indicate that the species’ NGS data were generated in this study.