Table 5.
Primers used for ChIP assays
| Primer | Sequence |
|---|---|
| FLT3 GLI1 site 1 | |
| Sense | CCTCCCAAGTAGCTACGACTA |
| Antisense | GCCAAGACCTAACACACTACC |
| FLT3 GLI1 site 2 | |
| Sense | GAGTGCAGTGGTGTGATCT |
| Antisense | TGCCTGTAATCCTAGCACTTT |
| FLT3 GLI1 site 3 | |
| Sense | CTGACTGGGTCCTGAGCATC |
| Antisense | TCCCCGAACTCTGTCGTTTG |
| FLT3 STAT3 site | |
| Sense | GCCATACCCTAGGGGAAAGAATTA |
| Antisense | CGTTTGACCTCCACAAACCT |
| PIM1 GLI1 site | |
| Sense | CTCATGTCCTGCGGATCCTT |
| Antisense | TCGAGCCGGAGCATAACAAG |
| PIM1 STAT3 site | |
| Sense | CAGCATCTGGCATCACAACAC |
| Antisense | GCAAAAGCACCAGCGAATCC |
| SOCS2 GLI1 site | |
| Sense | AGAGCCTGCTTCTCTTGTAGC |
| Antisense | CCTGGGATGCACTCAACGA |
| SOCS2 STAT3 site | |
| Sense | TCAAGTATGATGCAGCCATCAGGG |
| Antisense | TGAAATGAATCTTCCAGCAACTCCT |
| SOCS3 GLI1 site 1 | |
| Sense | CTGCTGAGATGAGCAGGCAG |
| Antisense | GAATCCTGCAGGGGGAGATG |
| SOCS3 GLI1 site 2 | |
| Sense | GACTCAAGCGATCCTTCCACCTT |
| Antisense | GTGAGATTTGGACAAGACACACAG |
| SOCS3 GLI1 site 3 | |
| Sense | GTCGGCCTCCTAGAACTGCC |
| Antisense | ACTCGCAGCAGACAAAGGCT |
| SOCS3 GLI1 site 4 | |
| Sense | CCTTCCCTTTCAGCACCTCA |
| Antisense | GTCACGTTGGCACTGACGTA |
| SOCS3 STAT3 site 1 | |
| Sense | TAGCCTGAACCCCCGAAAAC |
| Antisense | CTGTCTCCGGAGCTGGAAAG |
| SOCS3 STAT3 site 2 | |
| Sense | GTCGGCCTCCTAGAACTGCC |
| Antisense | ACTCGCAGCAGAGAAAGGCT |
| SOCS3 STAT3 site 3 | |
| Sense | AGCCTTTCTCTGCTGCGAGT |
| Antisense | CCGCGCTCGCGGGTAT |
| SOCS3 STAT3 site 4 | |
| Sense | CACCTCACTCATCACCTGGG |
| Antisense | ATAAACCTCTGCCGAGAGCC |
| SOCS3 STAT3 site 5 | |
| Sense | GACTGTCGCACGTCTCCAA |
| Antisense | GGCAGTTCTAGGAGGCCGAC |
| CAPN1 GLI1 site | |
| Sense | TCAACAATTCTCCTGCCTCA |
| Antisense | GTGGTGGCTAACACCTGTAAT |
| CAPN1 STAT3 site | |
| Sense | CCTGGCAACTGCTGATCTT |
| Antisense | TCACCACCACTTTGGAAGAC |
| GADD45G GLI1 site 1 | |
| Sense | AGGGAATTACTTGTAGCAGGGC |
| Antisense | TTGCTGTAGGGACAATCGAGG |
| GADD45G GLI1 site 2 | |
| Sense | CCTGGCATGTAGGCAGATT |
| Antisense | CAAACTCCTGACCTCGTGAT |
| GADD45G GLI1 site 3 | |
| Sense | GCAAGCGCAGAATGGAAACT |
| Antisense | GGTGAAGCCTTGGAGACTGG |
| GADD45G STAT3 site 1 | |
| Sense | ATTGAGATGGGGGCTTTGGG |
| Antisense | AGCTAGCCTGGACCAGAAGA |
| GADD45G STAT3 site 2 | |
| Sense | ACTAGCGAACAAACGGGGC |
| Antisense | GGTGAGAAGCTGGCGTCTTG |
| GADD45G STAT3 site 3 | |
| Sense | CGTGTATGGTCAAACGGCAG |
| Antisense | AAGGGCTGCAAAACGCATTC |
| GADD45G STAT3 site 4 | |
| Sense | GGGATCTTCCAGAGACGGC |
| Antisense | GGTAAAAACAGGTAGCGCCAG |
| ITGB3 GLI1 site | |
| Sense | CCCAAACCTGCTTCACATCA |
| Antisense | CCTCCTTAACTTATCATACAGTAGCC |
| PTGES2 GLI1 site 1 | |
| Sense | AGGCAGGCCAATAATGGGAG |
| Antisense | AGCCTATGCTCCCCAAGGTA |
| PTGES2 GLI1 site 2 | |
| Sense | AAGATCTTCATCACCTCAAACA |
| Antisense | TATACTGGAAGAGCTCGTGT |
| PTGES2 GLI1 site 3 | |
| Sense | CTGGTCTGTAAAGTGGCTGAA |
| Antisense | GAGTGGGTTTGGAGTTGTAGG |
| PTGES2 STAT3 site 1 | |
| Sense | TTGGCACACTGTAGGCATGT |
| Antisense | CAAAGCCACCCTCTTCCTCC |
| PTGES2 STAT3 site 2 | |
| Sense | GCCTTCCAGATAGCAGTAGTC |
| Antisense | TGTCAGTCACCTCCAATGATAG |
| PTGES2 STAT3 site 3 | |
| Sense | TTCGAAGCCAACATCCCGATT |
| Antisense | TTCCTTCCAGTCCTTGCGG |
| S100A8 GLI1 site | |
| Sense | CAGGGATGTATGGCCTGACC |
| Antisense | TTTTGGGTGGGGAGGTAGGA |
| S100A8 STAT3 site 1 | |
| Sense | GACTGAGCCCTTTCCTGTAAAC |
| Antisense | CTGACCAGCAAGATCGTGAAA |
| S100A8 STAT3 site 2 | |
| Sense | CTCAGGACTCCCTCACTGGA |
| Antisense | AGCATAACAGCACCTGCCTC |
| S100A8 STAT3 site 3 | |
| Sense | AAGGGTGGATCCTTGGTTG |
| Antisense | TAAGTTTGACCCTTCCCTTATCC |
| S100A8 STAT3 site 4 | |
| Sense | GGAATGGTGAGGAGGACATTA |
| Antisense | CCATGTCCGGGAACTATTCTAAG |
| THBS1 GLI1 site 1 | |
| Sense | GACCAGCTCCCTGAAAGGTC |
| Antisense | GCAGGGATGGGAAAAGGGAA |
| THBS1 GLI1 site 2 | |
| Sense | CATTCCGGGAGATCAGCTCG |
| Antisense | AAGCATCCCGAAAAGGGACG |
| THBS1 STAT3 site 1 | |
| Sense | TCCTGCCACCGTATAGGTCA |
| Antisense | GGCTTAGCTGTGCAGACAGA |
| THBS1 STAT3 site 2 | |
| Sense | TTGGTCAAGCTTCTACCTATGC |
| Antisense | CTGTCATTGAAGTCTGGTCTCC |