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. Author manuscript; available in PMC: 2021 Mar 1.
Published in final edited form as: Mol Ecol Resour. 2020 Jan 27;20(2):531–543. doi: 10.1111/1755-0998.13133

Table 3. Comparison of the metrics of the Yellow perch genome assembly (PLFA_1.0) with the Eurasian perch genome assembly (PFLUV_1.0).

Genome annotation metrics were calculated based our own yellow perch genome assembly (PFLA_1.0) and on the published Eurasian perch genome assembly (GCA_003412525.1, PFLUV_1.0).

Assembly metrics PFLA_1.0 PFLUV_1.0
Number of scaffolds 267 31,105
Total size of the assembly 877,440,133 958,225,486
Longest fragment 44,580,961 29,260,448
Shortest fragment 200 1,000
N50 fragment length 37,412,490 6,260,519
L50 fragment count 11 35
Assembly completeness PFLA_1.0 PFLUV_1.0
Complete BUSCOs 4,472 (97.6%) 4178 (91.1%[)
Complete and single-copy BUSCOS 4,363 (95.2%) 4058 (88.5%)
Complete and duplicated BUSCOS 109 (2.4%) 120 (2.6%)
Fragmented BUSCOs 41 (0.9%) 206 (4.5%)
Missing BUSCOs 71 (1.5%) 200 (4.4%)