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. 2020 Mar 2;10:3797. doi: 10.1038/s41598-020-60733-9

Figure 4.

Figure 4

Sequence logos based on the alignment of PB1 domains from the representative land plants (Marchantia, Physco, Amborella and Arabidopsis). Secondary structures (α-helices and β-sheets) represented on the top are based on the ARF5 structure (PDB ID: 4CHK). Numbers represented in the braces next to the name of the gene family, shows the number of sequences present in all these four species together, and also the number of sequences used for that particular alignment logo. Amino acids are coloured according to the group: ‘PAGFLIMV’, ‘KRH’ and ‘DE’ are shown in ‘purple’, ‘blue’ and ‘red’ colours respectively. All other amino acids are shown in ‘black’. Stars at the bottom represent the key residues on positive (blue) and negative (red) faces, corresponding to Lysine and OPCA motif (D-x-D/E-x-D/E core) respectively.