Table 3.
Top 20 significantly down-regulated lncRNAs.
| Sequence Name | P-value | FDR | Fold Change | Regulation | Strand | Relationship | CNV1 | CNV2 | CNV3 | Control1 | Control2 | Control3 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSMUST00000135495 | 0.044869 | 0.516189 | 7.465422 | down | - | exon sense-overlapping | 4.264994 | 6.259270 | 3.847529 | 8.927113 | 6.595256 | 7.550095 |
| ENSMUST00000151832 | 0.042431 | 0.506906 | 3.682991 | down | + | exon sense-overlapping | 3.973213 | 5.239059 | 4.472576 | 5.519285 | 6.476424 | 7.331772 |
| AK079094 | 0.000472 | 0.150561 | 2.875171 | down | - | natural antisense | 4.097720 | 3.991172 | 3.967711 | 5.716774 | 5.645347 | 5.265424 |
| ENSMUST00000171338 | 0.003991 | 0.284707 | 2.831007 | down | - | exon sense-overlapping | 4.347292 | 4.591844 | 4.052868 | 6.017756 | 5.435850 | 6.042344 |
| ENSMUST00000147716 | 0.002243 | 0.244886 | 2.805529 | down | - | intergenic | 7.029440 | 6.772935 | 7.329016 | 8.414517 | 8.813207 | 8.368486 |
| AK030988 | 0.004724 | 0.293747 | 2.720887 | down | - | intergenic | 7.828629 | 8.353325 | 8.177764 | 9.318910 | 9.964228 | 9.408810 |
| ENSMUST00000148202 | 0.005363 | 0.303718 | 2.572706 | down | - | intergenic | 3.028002 | 2.478576 | 3.041757 | 3.901149 | 4.463217 | 4.273829 |
| AK005624 | 0.012396 | 0.380110 | 2.559854 | down | + | bidirectional | 4.166821 | 3.256077 | 3.443728 | 5.159213 | 5.085467 | 4.690131 |
| AK009740 | 0.014086 | 0.383884 | 2.485166 | down | - | bidirectional | 2.530040 | 3.314212 | 2.545198 | 4.152919 | 4.397770 | 3.778787 |
| ENSMUST00000155217 | 0.000964 | 0.182037 | 2.460863 | down | - | intronic antisense | 7.949919 | 8.236430 | 8.067902 | 9.477743 | 9.536148 | 9.137853 |
| NR_037995 | 0.007062 | 0.335485 | 2.453643 | down | - | bidirectional | 7.028992 | 6.600705 | 6.301580 | 8.136388 | 8.017734 | 7.661932 |
| ENSMUST00000155625 | 0.004510 | 0.293747 | 2.406930 | down | - | exon sense-overlapping | 2.323709 | 2.787010 | 2.712476 | 4.039022 | 4.044215 | 3.541541 |
| uc007lit.1 | 0.039689 | 0.498925 | 2.389210 | down | + | natural antisense | 3.383898 | 2.440709 | 2.323922 | 3.760049 | 4.469326 | 3.688754 |
| ENSMUST00000141135 | 0.027081 | 0.445563 | 2.334129 | down | + | exon sense-overlapping | 3.241041 | 2.759476 | 2.558381 | 3.748812 | 3.811546 | 4.667192 |
| NR_033584 | 0.001977 | 0.240414 | 2.331771 | down | + | intergenic | 4.933888 | 5.203815 | 5.150325 | 6.451165 | 6.479938 | 6.021205 |
| TCONS_00016118 | 0.007575 | 0.340233 | 2.312752 | down | - | intronic antisense | 5.561865 | 5.562532 | 4.940521 | 6.790447 | 6.549662 | 6.353641 |
| AK029573 | 0.013265 | 0.380110 | 2.305416 | down | + | natural antisense | 4.500548 | 3.852448 | 3.562495 | 5.301173 | 5.106782 | 5.122617 |
| ENSMUST00000144044 | 0.040861 | 0.503207 | 2.225878 | down | + | exon sense-overlapping | 4.548734 | 5.325275 | 4.294675 | 6.335644 | 5.575793 | 5.720369 |
| NR_033469 | 0.005124 | 0.298875 | 2.225231 | down | + | intergenic | 6.507724 | 6.533446 | 6.704603 | 7.941327 | 7.926619 | 7.339692 |
| AK013439 | 0.011666 | 0.378564 | 2.208164 | down | + | intergenic | 6.454914 | 6.874332 | 6.432539 | 7.343084 | 8.090536 | 7.756705 |