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. 2020 Mar 2;86(6):e02788-19. doi: 10.1128/AEM.02788-19

TABLE 5.

PERMANOVA analysis of intestinal microbial diversity from gadoid species and ecotypesa

Populationsb R2 P value Adjusted P value
NEAC vs. NCC 0.71 0.0001 0.0005
NEAC vs. PC 0.53 0.0002 0.0018
NEAC vs. NP 0.70 0.0010 0.0076
NEAC vs. NSP 0.50 0.0041 0.0207
NCC vs. PC 0.42 0.0026 0.0182
NCC vs. NP 0.04 0.7138 0.7138
NCC vs. NSP 0.80 0.0035 0.0207
PC vs. NP 0.53 0.0233 0.0740
PC vs. NSP 0.80 0.0185 0.0740
NP vs. NSP 0.94 0.0286 0.0740
a

R2 values, P values, and adjusted P values for pairwise comparisons of community composition (beta diversity) between the different species or ecotypes using PERMANOVA. The tests are based on Bray-Curtis dissimilarity calculated from order-level, normalized sequence counts. P values are adjusted for multiple testing by the Holm method. Significant differences (P < 0.05) are indicated in bold. (Genus- and species-level results can be found in Table S6.)

b

NEAC, Northeast Arctic cod; NCC, Norwegian coastal cod; PC, poor cod; NP, Norway pout; NSP, northern silvery pout.