TABLE 3.
Metadata of available sequencing data of H. i. irritans samples
| Location of H. i. irritans sample and collection date | Sample and type of sequencing | NCBI accession no. | Reference |
|---|---|---|---|
| Agricultural Center St. Gabriel Research Station Louisiana, USA; collected 2008 | Larval and embryonic samples; poly(A)-enriched RNA-Seq, EST | Larval EST, FD457983–FD466257; embryonic EST, FD449556–FD457982 | 60 |
| Agricultural Center St. Gabriel Research Station Louisiana, USA; collected 28 July 2010 | Whole male and females; permethrin-treated surviving males and permethrin- and piperonyl butoxide-treated killed males; poly(A)-enriched RNA-Seq, Illumina Genome Analyzer II/Illumina HiSeq 2000 | Assembled transcriptome, GGLM01000000; Bioproject, PRJNA429442 | 59 |
| Agricultural Center St. Gabriel Research Station Louisiana, USA; collected 2010 | Eggs, larvae, whole male and females; poly(A)-enriched RNA-Seq, 454 | Male, SRR003192; female, SRR003191; egg, SRR003190; larvae, SRR003189 | 95 |
| Ciudad Victoria, Tamaulipas, Mexico; collected prior to August 2010 | Abdominal tissues of partially fed adult female; poly(A)-enriched RNA-Seq, EST |
HO000420–HO001165, HO004499–HO004744 |
61 |
| Pressler Cattle Ranch Kerrville, TX; originally collected 2003 and sampled 2010 | Single male adult; random DNA sequencing using 454 | SRA, SRR1578740 | 63 |
| Canelones, Uruguay; collected 2016 | Salivary glands and midgut samples, poly(A)-enriched RNA-Seq, Illumina HiSeq 2000 | SRA salivary glands, SRR5136552, SRR5136553; SRA midguts, SRR5136554, SRR5136555 | 62 |