TABLE 3.
SNPs genotypes | rs2970848 | rs2970870 | rs6821591 | |||||||
AA | AG + GG | P | AG | AA + GG | P | TT | CT + CC | P | ||
Mean PPARGC1A methylation level (%) | PD | 7.29 ± 1.59 | 7.02 ± 1.94 | 0.473 | 7.30 ± 1.76 | 6.98 ± 1.72 | 0.398 | 7.27 ± 1.64 | 7.12 ± 1.80 | 0.688 |
Con | 6.50 ± 1.30 | 6.23 ± 1.27 | 0.342 | 6.43 ± 1.36 | 6.28 ± 1.20 | 0.610 | 6.52 ± 1.39 | 6.18 ± 1.15 | 0.236 | |
Total | 6.94 ± 1.52 | 6.61 ± 1.66 | 0.167 | 6.91 ± 1.64 | 6.62 ± 1.50 | 0.239 | 6.85 ± 1.54 | 6.74 ± 1.63 | 0.641 | |
CpG_1 | PD | 3.71 ± 2.26 | 3.24 ± 2.10 | 0.313 | 3.68 ± 2.28 | 3.24 ± 2.05 | 0.356 | 3.52 ± 2.29 | 3.51 ± 2.16 | 0.989 |
Con | 2.65 ± 1.78 | 2.66 ± 1.64 | 0.982 | 3.00 ± 1.80 | 2.22 ± 1.48 | 0.040 | 2.43 ± 1.82 | 2.90 ± 1.54 | 0.216 | |
Total | 3.25 ± 2.12 | 2.94 ± 1.88 | 0.312 | 3.38 ± 2.10 | 2.71 ± 1.84 | 0.034 | 2.91 ± 2.10 | 3.26 ± 1.94 | 0.256 | |
CpG_13.14 | PD | 7.73 ± 1.84 | 6.71 ± 2.10 | 0.016 | 7.27 ± 2.06 | 7.35 ± 1.95 | 0.847 | 7.24 ± 1.77 | 7.33 ± 2.15 | 0.837 |
Con | 6.67 ± 1.73 | 6.59 ± 1.76 | 0.818 | 6.84 ± 1.76 | 6.36 ± 1.69 | 0.215 | 6.95 ± 1.74 | 6.28 ± 1.69 | 0.082 | |
Total | 7.27 ± 1.86 | 6.65 ± 1.92 | 0.032 | 7.08 ± 1.93 | 6.84 ± 1.88 | 0.427 | 7.08 ± 1.75 | 6.91 ± 2.03 | 0.556 | |
CpG_17.18 | PD | 9.44 ± 6.82 | 9.95 ± 8.31 | 0.752 | 10.46 ± 8.53 | 8.32 ± 5.03 | 0.187 | 10.12 ± 7.68 | 9.39 ± 7.36 | 0.654 |
Con | 4.60 ± 4.28 | 6.07 ± 4.33 | 0.128 | 5.78 ± 5.06 | 4.81 ± 3.23 | 0.320 | 5.40 ± 4.24 | 5.28 ± 4.51 | 0.900 | |
Total | 7.34 ± 6.30 | 7.94 ± 6.80 | 0.550 | 8.38 ± 7.53 | 6.51 ± 4.53 | 0.066 | 7.48 ± 6.40 | 7.72 ± 6.64 | 0.813 | |
CpG_20 | PD | 2.00 ± 1.62 | 2.47 ± 2.66 | 0.298 | 2.43 ± 2.47 | 1.82 ± 1.31 | 0.191 | 1.82 ± 1.47 | 2.42 ± 2.41 | 0.195 |
Con | 1.50 ± 1.41 | 1.56 ± 1.34 | 0.843 | 1.64 ± 1.50 | 1.40 ± 1.20 | 0.408 | 1.33 ± 1.41 | 1.74 ± 1.31 | 0.180 | |
Total | 1.78 ± 1.55 | 2.00 ± 2.12 | 0.440 | 2.08 ± 2.12 | 1.60 ± 1.27 | 0.092 | 1.55 ± 1.45 | 2.15 ± 2.05 | 0.033 |
Significant results are highlighted in bold. P-value for Mann–Whitney U test.