Table 2.
Genes in the sequenced P. ovata chloroplast genome.
Category | Group of genes | Name of genes |
---|---|---|
Self-replication | Large subunit of ribosomal proteins | rpl2*,a, 14, 16*, 20, 22, 23a, 32, 33, 36 |
Small subunit of ribosomal proteins | rps2, 3, 4, 7a, 8, 11, 12*,a, 14, 15a,16*, 18, 19 | |
DNA dependent RNA polymerase | rpoA, B a, C1*, C2 | |
rRNA genes | rrn 4.5, rrn 5, rrn 16, rrn23 | |
tRNA genes | trnA-UGC*, trnC-GCA, trnD-GUC, trnE-UUC trnF-GAA, trnfM-CAU, trnG-UCC, trnH-GUG, trnI-CAU, trnI-GAU*, trnK-UUU*, trnL-CAA, trnL-UAA*, trnL-UAG, trnM-CAU, trnN-GUU, trnP-GGG, trnP-UGG, trnQ-UUG, trnR-ACG, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC, trnV-UAC*, trnW-CCA, trnY-GUA | |
Photosynthesis | Photosystem I | psaA, B, Ca, I, J, |
Photosystem II | psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z | |
NadH oxidoreductase | NdhA*,a, B*,a, C, Da, Ea, F, Ga, Ha, Ia, J, K | |
Cytochrome b6/f complex | petA, Ba, D*, G, L, N | |
ATP synthase | atpA, B, E, F*, H, I | |
Rubisco | rbcL | |
Other genes | Maturase | matK |
Protease | clpP* | |
Envelop membrane protein | cemA | |
Subunit Acetyl- CoA-Carboxylate | accD | |
c-type cytochrome synthesis gene | ccsA | |
Unknown | Conserved Open reading frames | ycf1a, 2*,a, 3*, 4, 15a |
*Genes containing introns; aDuplicated gene (Genes present in the IR regions).