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Classification for the DR sequences.
| Secondary structure | Strain | Consensus direct repeat sequence | Minimum free energy (MFE) / kcal/mol |
| Non-circular | FHNFQ36L4 | GTTTTAGAAGGATGTTAA ATCAATAAGGTTAAACCC | −1.6 |
| HN26M2_2 | |||
| JHNZZ2M34 | GTTTCAGAAGAATGTTAA ATCAATAAGTTCAAGTAC | −0.3 | |
| FYNLJ90L2 | |||
| DYNDL69M8 | TGTTAAATCAA CAAGTTCAAGTACT | −0.10 | |
| Circular | 27 strains | TGTTAAATC AATAAGTTCAAGTAC | 0 |
