Table 3. Molecular-dynamics simulation of the agonist Ach and the antagonist tiotropium with different forms of M4.
System | Mutation details | Ligand | Simulation time (µs) × No. of runs |
---|---|---|---|
PDB entry 5dsg | None | Ach | 2 × 3 |
Tiotropium | 2 × 3 | ||
M40 | None | Ach | 2 × 3 |
Tiotropium | 2 × 3 | ||
M41 | N4497.49R | Ach | 2 × 3 |
Tiotropium | 2 × 3 | ||
M46 | I932.65T, G1504.43A, I187ECL2A, S2195.62Y, N4497.49R, T4598.49E | Ach | 2 × 3 |
Tiotropium | 2 × 3 |