Table 1. Trichoderma species identified from garlic and onion crop soils in Brazil and Genbank accession numbers of their partial actin, calmodulin, rpb2, tef1-α and ITS sequences used in phylogenetic analysis.
Species | Strain | Collection location | Crop | act | cal | rpb2 | tef1-α | ITS |
---|---|---|---|---|---|---|---|---|
T. koningiopsis | CEN1386 | Curitibanos, SC | Garlic | MK696725 | MK696671 | MK696779 | MK696617 | MK714859 |
T. peberdyi | CEN1387 | Curitibanos, SC | Garlic | MK696727 | MK696673 | MK696781 | MK696619 | MK714861 |
T. peberdyi | CEN1388 | Curitibanos, SC | Garlic | MK696728 | MK696674 | MK696782 | MK696620 | MK714862 |
T. peberdyi | CEN1389 | Curitibanos, SC | Garlic | MK696729 | MK696675 | MK696783 | MK696621 | MK714863 |
T. peberdyi | CEN1390 | Curitibanos, SC | Garlic | MK696730 | MK696676 | MK696784 | MK696622 | MK714864 |
T. peberdyi | CEN1391 | Rio Paranaíba, MG | Garlic | MK696731 | MK696677 | MK696785 | MK696623 | MK714865 |
T. peberdyi | CEN1392 | Rio Paranaíba, MG | Garlic | MK696732 | MK696678 | MK696786 | MK696624 | MK714866 |
T. peberdyi | CEN1393 | Rio Paranaíba, MG | Garlic | MK696734 | MK696680 | MK696788 | MK696626 | MK714868 |
T. hamatum | CEN1394 | Rio Paranaíba, MG | Garlic | MK696735 | MK696681 | MK696789 | MK696627 | MK714869 |
T. hamatum | CEN1395 | Rio Paranaíba, MG | Garlic | MK696736 | MK696682 | MK696790 | MK696628 | MK714870 |
T. asperelloides | CEN1396 | Rio Paranaíba, MG | Garlic | MK696737 | MK696683 | MK696791 | MK696629 | MK714871 |
T. asperelloides | CEN1397 | Rio Paranaíba, MG | Garlic | MK696738 | MK696684 | MK696792 | MK696630 | MK714872 |
T. peberdyi | CEN1398 | Bueno Brandão, MG | Garlic | MK696740 | MK696686 | MK696794 | MK696632 | MK714874 |
T. longibrachiatum | CEN1399 | São Marcos, RS | Garlic | MK696741 | MK696687 | MK696795 | MK696633 | MK714875 |
T. longibrachiatum | CEN1400 | São Marcos, RS | Garlic | MK696742 | MK696688 | MK696796 | MK696634 | MK714876 |
T. longibrachiatum | CEN1401 | São Marcos, RS | Garlic | MK696744 | MK696690 | MK696798 | MK696636 | MK714878 |
T. longibrachiatum | CEN1402 | São Marcos, RS | Garlic | MK696745 | MK696691 | MK696799 | MK696637 | MK714879 |
T. azevedoi | CEN1403 | São Marcos, RS | Garlic | MK696746 | MK696692 | MK696800 | MK696638 | MK714880 |
T. longibrachiatum | CEN1404 | São Marcos, RS | Garlic | MK696747 | MK696693 | MK696801 | MK696639 | MK714881 |
T. koningiopsis | CEN1405 | São Marcos, RS | Garlic | MK696749 | MK696695 | MK696803 | MK696641 | MK714883 |
T. koningiopsis | CEN1406 | São Marcos, RS | Garlic | MK696750 | MK696696 | MK696804 | MK696642 | MK714884 |
T. koningiopsis | CEN1407 | São Marcos, RS | Garlic | MK696751 | MK696697 | MK696805 | MK696643 | MK714885 |
T. asperelloides | CEN1408 | Monte Alto, SP | Onion | MK696753 | MK696699 | MK696807 | MK696645 | MK714887 |
T. asperelloides | CEN1409 | Monte Alto, SP | Onion | MK696755 | MK696701 | MK696808 | MK696647 | MK714889 |
T. afroharzianum | CEN1410 | Monte Alto, SP | Onion | MK696756 | MK696702 | MK696809 | MK696648 | MK714890 |
T. asperelloides | CEN1411 | Monte Alto, SP | Onion | MK696757 | MK696703 | MK696810 | MK696649 | MK714891 |
T. lentiforme | CEN1412 | Monte Alto, SP | Onion | MK696758 | MK696704 | MK696811 | MK696650 | MK714892 |
T. asperelloides | CEN1413 | Monte Alto, SP | Onion | MK696759 | MK696705 | MK696812 | MK696651 | MK714893 |
T. afroharzianum | CEN1414 | Monte Alto, SP | Onion | MK696760 | MK696706 | MK696813 | MK696652 | MK714894 |
T. lentiforme | CEN1415 | São José do Rio Pardo, SP | Onion | MK696761 | MK696707 | MK696814 | MK696653 | MK714895 |
T. lentiforme | CEN1416 | São José do Rio Pardo, SP | Onion | MK696762 | MK696708 | MK696815 | MK696654 | MK714896 |
T. afroharzianum | CEN1417 | São José do Rio Pardo, SP | Onion | MK696763 | MK696709 | MK696816 | MK696655 | MK714897 |
T. asperelloides | CEN1418 | São José do Rio Pardo, SP | Onion | MK696764 | MK696710 | MK696817 | MK696656 | MK714898 |
T. asperelloides | CEN1419 | São José do Rio Pardo, SP | Onion | MK696765 | MK696711 | MK696818 | MK696657 | MK714899 |
T. erinaceum | CEN1420 | São José do Rio Pardo, SP | Onion | MK696766 | MK696712 | MK696819 | MK696658 | MK714900 |
T. erinaceum | CEN1421 | São José do Rio Pardo, SP | Onion | MK696767 | MK696713 | MK696820 | MK696659 | MK714901 |
T. azevedoi | CEN1422 | Rio Paranaíba, MG | Onion | MK696768 | MK696714 | MK696821 | MK696660 | MK714902 |
T. azevedoi | CEN1423 | Rio Paranaíba, MG | Onion | MK696769 | MK696715 | MK696822 | MK696661 | MK714903 |
T. asperelloides | CEN1424 | Rio Paranaíba, MG | Onion | MK696770 | MK696716 | MK696823 | MK696662 | MK714904 |
T. peberdyi | CEN1425 | Rio Paranaíba, MG | Onion | MK696771 | MK696717 | MK696824 | MK696663 | MK714905 |
T. peberdyi | CEN1426 | Itobi, SP | Onion | MK696772 | MK696718 | MK696825 | MK696664 | MK714906 |
T. asperelloides | CEN1427 | Itobi, SP | Onion | MK696773 | MK696719 | MK696826 | MK696665 | MK714907 |
T. lentiforme | CEN1428 | Itobi, SP | Onion | MK696775 | MK696721 | MK696827 | MK696667 | MK714909 |
T. lentiforme | CEN1429 | São José do Rio Pardo, SP | Onion | MK696776 | MK696722 | MK696828 | MK696668 | MK714910 |
T. asperelloides | CEN1430 | São José do Rio Pardo, SP | Onion | MK696777 | MK696723 | MK696829 | MK696669 | MK714911 |
T. asperelloides | CEN1431 | Sacramento, MG | Onion | MK696778 | MK696724 | MK696830 | MK696670 | MK714912 |
T. peberdyi | CEN1457 | Curitibanos, SC | Garlic | MK696726 | MK696672 | MK696780 | MK696618 | MK714860 |
T. peberdyi | CEN1458 | Curitibanos, SC | Garlic | MK696733 | MK696679 | MK696787 | MK696625 | MK714867 |
T. asperelloides | CEN1459 | Bueno Brandão, MG | Garlic | MK696739 | MK696685 | MK696793 | MK696631 | MK714873 |
T. longibrachiatum | CEN1460 | São Marcos, RS | Garlic | MK696743 | MK696689 | MK696797 | MK696635 | MK714877 |
T. longibrachiatum | CEN1461 | São Marcos, RS | Garlic | MK696748 | MK696694 | MK696802 | MK696640 | MK714882 |
T. longibrachiatum | CEN1462 | São Marcos, RS | Garlic | MK696752 | MK696698 | MK696806 | MK696644 | MK714886 |
T. asperellum | CEN1463 | Monte Alto, SP | Onion | MK696754 | MK696700 | - | MK696646 | MK714888 |
T. asperellum | CEN1464 | Itobi, SP | Onion | MK696774 | MK696720 | - | MK696666 | MK714908 |