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. 2020 Feb 27;10:1406. doi: 10.3389/fgene.2019.01406

Table 3.

Evaluation of relative synonymous codon usage (RSCU) in immune-relevant genes in Salmo salar.

Nucleotide accession number Gene Gene acronym sSNP Amino acid Codon change RSCU ΔRSCU
From To From To
NM_001165324.1 cd18 cd18 c.2275G>A T ACG ACA 0.48 1.00 0.52
NM_001141472.1 glutathione transferase omega-1 gsto-1 c.558G>A A GCG GCA 0.44 0.84 0.40
BT046112.1 heat shock 70 kDa protein hsp70 c.1950C>T P CCG CCT 1.52 1.04 -0.48

Bold letter represents the nucleotide variations in codon for each synonymous single-nucleotide polymorphism (sSNP). RSCU and ΔRSCU values were calculated (ΔRSCU = RSCU mutant - RSCU wild type).