Table 1. Description and Repositories for AUDIT Modules.
Namea | Description | URL |
---|---|---|
mtpview | Easily view your MTP data | https://github.com/npjc/mtpview1 |
readcg12 | Parse raw input files from CG-12 instruments (S&P Robotics) | https://github.com/npjc/readcg12 |
readgp1 | Parse raw input files from GP1 instruments (S&P Robotics) | https://github.com/npjc/readgp1 |
readyg | Parse raw input files from YG (ACCESS) files [Proctor et al. (2011) Proctor, Urbanus, Fung, Jaramillo, Davis, Nislow, and Giaever] | https://github.com/npjc/readyg |
readbioscreen | Parse raw input files from BioScreen instruments (Oy Growth Curve) | https://github.com/npjc/readbioscreen |
growr | Preprocessing, summarizing and grouping of growth curves. | https://github.com/npjc/growr |
Each module is an R package available from github with its own documentation and additional functions not directly available in AUDIT.