Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2020 Jan 9;10(3):881–890. doi: 10.1534/g3.119.400716

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2020 Susic et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Clustering of putative nematode-virulent proteases found in Bacillus firmus I-1582 (light-gray) and Bacillus sp. ZZV12-4809 (dark-gray) genomes. All-against-all comparison of amino-acid sequences is based on percent (%) identity values calculated with Clustal Omega and presented in a heatmap, ranging from lower (violet) to higher sequence identity (green-yellow). A dendrogram was created using hierarchical clustering by Euclidean distance. The identities of analyzed proteins are given as genomic annotations together with PATRIC IDs (left-hand margin). Colored highlights (bottom margin) represent clustering of sequences according to the conserved peptidase family domains: S8 (blue), M4 (magenta), M6 (cyan), M48 (orange), or other (no color). Asterisks (*) denote high-similarity protein sequences to the nematicidal protease Sep1 from B. firmus DS1.