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. Author manuscript; available in PMC: 2020 Oct 15.
Published in final edited form as: Biochemistry. 2019 Oct 4;58(41):4169–4182. doi: 10.1021/acs.biochem.9b00735

Table 1.

Comparison of the SSN job parameters for the GRE superfamily (IPR004184).

Job Time (min) (Meta)nodes before filtering Edges before filtering (Meta)nodes after filtering Edges after filtering Clusters Singletons xgmml MB
UniProt 340 20,232 166,127,802 16,299 32,789,379 200 196 8,770
UniRef90 40 6,020 13,553,197 4,178 1,187,272 200 196 336
UniRef50 10 1,365 449,488 520 179 234 174 8