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. 2020 Feb 25;10:189. doi: 10.3389/fonc.2020.00189

Table 1.

Types of tests available for genetic/genomic analysis in MM.

Target Cost per sample Type of variants detected Number of variants detected Advantages Limitations
WGS Whole genome ~€1,500 per sample Mutations (coding and non-coding), indels, aneuploidies, CNAs, structural rearrangements, signatures Thousands Comprehensive genomic characterization Cost, analysis, storage of data, low depth
WES Coding genome (2%) ~€500 per sample Mutations (coding), indels, aneuploidies, CNAs Hundreds Lower cost, carries most of clinically useful information, easier analysis No information on non-coding genome
Targeted Custom number of genes/regions Variable Mutations (coding), indels, aneuploidies, CNAs Variable Customizable, lowest cost and complexity of analysis, limited storage required Not useful for discovery approaches
FISH Custom number of regions ~€100 per probe Deletions, gains, translocations None Familiar to most laboratories, short turnaround time No mutations detected, ideal for a low number of probes