Table 1.
Comparison of QTL locations detected by biparental QTL mapping in ExR53-DH and by GWAS in a NAM panel using SNP and SNaP markers.
| chromosome | QTL ID in biparental population | Start position of QTL interval in ExR53-DH | Stop position of QTL in ExR53-DH | Size of QTL interval (bp) |
QTL ID in NAM population |
Start position of QTL LD block in NAM population | Stop position of QTL LD block in NAM population | Size of LD block (bp) |
|---|---|---|---|---|---|---|---|---|
| chrA03 | q23k-BP-A3-1 | 7,963,059 | 11,419,476 | 3,456,417 | q22k-NAM-A3-2 | 10,075,388 | 10,458,202 | 382,814 |
| chrA05 | q23k-BP-A5-2 | 2,357,535 | 2,473,365 | 115,830 | q22k-NAM-A5 | 2,384,153 | 2,808,636 | 424,483 |
| chrC05 |
q23k-BP-C5-1 and q23k-BP-C5-2 |
3,670,200 and 3,688,115 |
3,672,842 and 3,949,617 |
2,642 and 261,502 |
q22k-NAM-C5-2 | 3,089,132 | 3,698,279 | 609,147 |
| chrC08 | q23k-BP-C8 | 801,925 | 13,488,675 | 12,686,750 | q22k-NAM-C8 | 12,201,749 | 12,596,542 | 394,793 |