TABLE 1.
Climatic zone | Sequence variant ID | Occurrence | Taxonomy1 | Number of samples | Relative abundance (%) |
Mid hot-dry (n = 9) | ASV5 | 1.00 | Pseudomonas | 9 | 2.11–12.65 |
ASV428 | 1.00 | Pseudomonas | 9 | 1.33–12.26 | |
ASV17 | 1.00 | Enterobacteriaceae | 9 | 4.35–38.84 | |
ASV1 | 0.89 | Enterobacteriaceae | 8 | 0.56–51.09 | |
ASV11 | 0.67 | Pseudomonas | 6 | 0.09–29.55 | |
ASV2 | 0.67 | Pseudomonas | 6 | 0.1–4.71 | |
ASV8 | 0.67 | Duganella | 6 | 0.0–12.35 | |
ASV147 | 0.67 | Sphingobium | 6 | 0.0–4.42 | |
ASV233 | 0.55 | Pseudomonas | 5 | 0.0–19.07 | |
Hot-dry (n = 10) | ASV5 | 0.90 | Pseudomonas | 9 | 0.72–45.67 |
ASV1 | 0.80 | Enterobacteriaceae | 8 | 0.0–49.93 | |
ASV2 | 0.60 | Pseudomonas | 6 | 0.0–28.53 | |
ASV354 | 0.50 | Enterobacteriaceae | 5 | 0.0–22.56 | |
Moist-cool (n = 15) | ASV17 | 1.00 | Enterobacteriaceae | 15 | 9.84–44.98 |
ASV5 | 0.93 | Pseudomonas | 14 | 0.44–53.36 | |
ASV439 | 0.80 | Pectobacterium | 12 | 0.0–22.48 | |
ASV1 | 0.73 | Enterobacteriaceae | 11 | 0.0–15.10 | |
ASV41 | 0.73 | Xanthomonas | 11 | 0.07–12.72 | |
ASV233 | 0.67 | Pseudomonas | 10 | 0.0–16.08 | |
ASV8 | 0.53 | Duganella | 8 | 0.0–6.33 |
1Full taxonomy lineage is reported in Supplementary Table S4.