Table 1.
Response functiona | Promoter interferencea | Kineticsa | ||||||
---|---|---|---|---|---|---|---|---|
y min | y max | K | n | Non‐specific (α) | Roadblocking (β)b | Induction () | Relaxation () | |
F1‐AmeR_2 | 0.29 | 4.6 | 0.12 | 1.5 | 0.09 | 1.00 | 8.00 | 2.30 |
F2‐AmeR_2 | 0.21 | 3.7 | 0.04 | 1.3 | 0.10 | 1.00 | 8.00 | 2.50 |
N1‐LmrA_2 | 0.077 | 1.3 | 0.09 | 1.8 | 0.28 | 1.00 | 1.00 | 1.30 |
A1‐AmtR_2 | 0.035 | 3.1 | 0.05 | 1.7 | 0.27 | 1.00 | 0.90 | 2.50 |
H1‐HlyIIR_2 | 0.004 | 2.1 | 0.13 | 2.6 | 0.15 | 1.00 | 0.45 | 4.00 |
P1‐PhlF | 0.004 | 6.9 | 0.04 | 3.8 | 0.22 | 0.06 | 0.30 | 4.00 |
P2‐PhlF | 0.007 | 7.5 | 0.21 | 4.5 | 0.15 | 0.12 | 0.20 | 4.00 |
P3‐PhlF | 0.004 | 7.1 | 0.12 | 3.3 | 0.24 | 0.06 | 0.15 | 5.00 |
S1‐SrpR | 0.001 | 1.4 | 0.02 | 3.1 | 0.50 | 0.05 | 5.00 | 7.00 |
S2‐SrpR | 0.003 | 3.2 | 0.06 | 2.7 | 0.35 | 0.09 | 0.50 | 7.00 |
S3‐SrpR | 0.004 | 3.1 | 0.09 | 2.7 | 0.33 | 0.10 | 0.70 | 6.00 |
S4‐SrpR | 0.004 | 3.2 | 0.11 | 2.7 | 0.38 | 0.09 | 1.80 | 8.00 |
E1‐BetI_2 | 0.041 | 2.8 | 0.28 | 2.9 | 0.64 | 0.46 | 0.40 | 1.50 |
B1‐BM3R1 | 0.004 | 0.6 | 0.06 | 2.9 | 0.64 | 0.05 | 0.90 | 1.10 |
B2‐BM3R1 | 0.006 | 0.5 | 0.57 | 3.8 | 0.71 | 0.05 | 0.90 | 1.10 |
B3‐BM3R1 | 0.005 | 0.6 | 0.21 | 3.1 | 0.74 | 0.05 | 0.50 | 2.00 |
C1‐CymR | 0.010 | 3.0 | 0.10 | 3.7 | 0.10 | 0.07 | 0.50 | 2.50 |
V1‐VanR | 0.043 | 6.2 | 0.05 | 2.9 | 0.12 | 0.32 | 0.40 | 11.0 |
The maximum allowed value is one during fitting.
The units of y min and y max are RPU. The units of K are RPU. The timescales are in units of 1/h. n, α, and β are unitless.