Table 2:
Assembly statistics
Software | Assembly level | No. of sequences | N50 (Mb) | size (Gb) | |
---|---|---|---|---|---|
Nanopore | Smartdenovo, Racon, and Pilon | Contig | 597 | 5.0 | 760.1 |
Nanopore and Hi-C | Lachesis | Chromosome | 17 + 514a | 39.7 | 676.2 + 83.9 |
There are 514 unplaced scaffolds in the final chromosome-level assembly. These unplaced contigs comprise ∼10.73% of total bases in the genome assembly size.