Figure 3.
Sketch map of the growing operation. (A) The seed structure in the binding site and chosen fragment (dashed box) in the building block library (solid box). All potential growing sites are colored in blue. (B) The randomly chosen growing site of seed structure and chosen fragment are colored in red. (C) The chosen fragment is moved and then attached to the seed structure. The favorable conformations are determined by uniformly 3 degree-step sampling of the torsion angle along the newly formed bond, which is colored in red.