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Case study of the effects of contextual amino acid embeddings on two chains of a protein complex, 1B3S_A for barnase and 1B3S_D for barstar
| L 2 distances | Ground truth | ΔΔG Predictions | |||
|---|---|---|---|---|---|
| Mutation(s) | D static |
|
ΔΔG | MuPIPR-static | MuPIPR |
| D_F30Y | −0.0027 | −0.0073 | 0.596 | −5.534 | 0.185 |
| A_A102H | 0.0021 | −0.0518 | −5.682 | −5.032 | −6.141 |
| A_A102H, D_F30Y | −0.0006 | −0.0591 | −9.549 | −2.082 | −8.868 |
