Table 12. Number of biallelic SNVs in our call set (‘ This_work’) and in the ‘ Lift-over’ call set.

‘ novel’ represent the new contigs added to GRCh38 whereas ‘ existing’ represent the rest of the genomic regions that were already present in GRCh37.

Region	This_work	Lift-over	Total
novel	1,019,976 (55.7%)	811,817 (44.3%)	1,831,793 (100%)
existing	70,809,835 (48%)	76,588,820 (52%)	147,398,655 (100%)