Table 1. Statistics of the distribution of datasets and biomarkers in CancerLivER.
Distribution of datasets | |||||
---|---|---|---|---|---|
Based on liver cancer types | Based on types of transcripts | Based on profiling techniques | |||
Hepatocellular carcinoma (HCC) | 111 | Coding | 45 | Affymetrix | 38 |
Cholangiocarcinoma (CCA) | 5 | Non-coding | 25 | Illumina | 24 |
Hepatoblastoma | 3 | Both | 45 | Agilent | 22 |
Fibrolamellar hepatocellular carcinoma | 2 | High-throughput | 21 | ||
Other array | 10 | ||||
Distribution of biomarkers | |||||
Based on type of Biomarkers | Based on biomolecule | Based on source of samples | |||
Diagnostic | 341 | RNA | 315 | Tissue | 452 |
Prognostic | 165 | Protein | 178 | Serum | 55 |
Predictive | 51 | miRNA | 46 | Plasma | 52 |
Both diagnostic and prognostic | 37 | Metabolite | 35 | Urine | 44 |
lincRNA | 19 | Cell line or cells | 35 | ||
Others | 8 |