TABLE 3.
Discrimination of inflammatory phenotypes using gene expression
AUC | p-value | Cut-off point | Sens | Spec | PPV | NPV | Kappa | |
Eosinophilic asthma versus non-eosinophilic asthma | ||||||||
Manual plugs | 0.85 | 0.1 | 0.39 | 56 | 80 | 71 | 67 | 0.22 |
Whole sample | 1.00 | 0.01 | 0.99 | 67 | 100 | 100 | 77 | 0.72 |
Neutrophilic asthma versus non-neutrophilic asthma | ||||||||
Manual plugs | 1.00 | 0.008 | 0.99 | 80 | 100 | 100 | 93 | 0.68 |
Whole sample | 0.84 | 0.2 | 0.62 | 80 | 100 | 100 | 93 | 0.68 |
All measures are relative to the classification from the manual cell differential count. AUC: area under the curve; Sens: sensitivity; Spec: specificity; PPV: positive predictive value; NPV: negative predictive value; Kappa: Cohen's kappa coefficient for agreement with the gold-standard classification based on the cell differential count.