Table 2.
Vascular invasion-related genes.
| Gene | Boruta algrithm* (P values) | Fisher’s test and Pearson’s test (P values) | ||||
|---|---|---|---|---|---|---|
| TCGA | Inserm | AMC | TCGA | Inserm | AMC | |
| AKAP6 | P < 0.05 | 0.1862 | 1.0000 | 0.3251 | ||
| OBSCN | P < 0.05 | 0.0210 | 0.5661 | 0.5330 | ||
| TSC2 | P < 0.05 | P < 0.05 | 0.1285 | 0.0317 | 0.6768 | |
| LAMA1 | P < 0.05 | 0.2509 | 0.7299 | 0.2885 | ||
| BIRC6 | P < 0.05 | 0.7260 | 0.0415 | 0.3633 | ||
| DNAH5 | P < 0.05 | 0.8609 | 0.0171 | 0.5176 | ||
| PKHD1 | P < 0.05 | 0.1894 | 0.0415 | 0.6734 | ||
| KIAA1109 | P < 0.05 | 1.0000 | 0.0415 | 0.5599 | ||
| DYNC1H1 | P < 0.05 | 0.2714 | 0.0232 | 0.5149 | ||
| FCGBP | P <0.05 | 0.5030 | 0.0735 | 0.6734 | ||
| FREM2 | P < 0.05 | 0.1894 | 0.1289 | 0.4228 | ||
| PLXNA1 | P < 0.05 | 0.3550 | 0.1817 | 0.0246 | ||
| MUC12 | P < 0.05 | 1.0000 | 1.0000 | 0.0204 | ||
| BSN | P < 0.05 | 0.2371 | 1.0000 | 0.0208 | ||
| PLA2G4A | P < 0.05 | 0.2359 | 1.0000 | 0.0506 | ||
| LAMA2 | P < 0.05 | 0.7700 | 0.6626 | 0.1640 | ||
| PTPRZ1 | P < 0.05 | 0.7405 | 0.4576 | 0.06794 | ||
| CIT | P < 0.05 | 1.0000 | 1.0000 | 0.0866 | ||
*Boruta algorithm is a preliminary screening algorithm. P < 0.05 is the preset condition for preliminary screening. The relevant genes screened out do not give specific P values. After preliminary screening, Fisher’s test and Pearson’s test are used for accurate calculation.