TABLE 3.
Nucleotide and amino acid sequence identities (%) between Kenyan MWMV isolates and those from Tunisia and South Africa.
| Among Kenyan isolates | Between Kenyan and a Tunisian | Between Kenyan and a South | ||||
| Genome features |
(MH595736-46) |
isolate (EF579955) |
African isolate (KU315176) |
|||
| aa | nt | aa | nt | aa | nt | |
| Polyprotein | 98.1–98.6 | 97.5–98.5 | 89.8–90.0 | 79.2–79.6 | 90.3–90.5 | 79.6–79.7 |
| P1 | 94.2–96.5 | 96.4–97.8 | 65.1–68.1 | 69.4–70.5 | 67.8–69.0 | 70.3–71.3 |
| HC-Pro | 97.4–98.9 | 97.0–98.8 | 93.7–94.7 | 79.7–80.3 | 93.7–94.7 | 79.5–80.4 |
| P3 | 97.9–99.3 | 97.5–98.8 | 87.4–88.5 | 79.3–79.9 | 89.2–90.1 | 79.9–80.7 |
| 6K1 | 100 | 96.8–99.4 | 94.2 | 80.8–81.4 | 94.2 | 82.1–83.3 |
| CI | 98.9–99.7 | 97.8–98.6 | 95.3–95.7 | 80.9–81.7 | 95.7–96.4 | 80.9–81.3 |
| 6K2 | 98.2–100 | 96.5–99.4 | 86.0–87.7 | 74.9–76.6 | 89.4–91.2 | 75.4–77.2 |
| VPg | 97.9–100 | 97.4–99.3 | 83.6–85.2 | 78.1–79.1 | 83.7–84.7 | 75.1–76.1 |
| NIa | 98.7–99.6 | 97.4–98.7 | 92.1–92.5 | 78.9–79.5 | 92.5–93.7 | 79.9–80.6 |
| NIb | 98.6–99.4 | 97.5–98.6 | 94.4–95.0 | 80.5–81.1 | 94.2–94.8 | 81.2–82.1 |
| CP | 97.6–99.7 | 97.6–99.2 | 93.7–95.1 | 84.3–84.9 | 94.1–95.1 | 83.9–85.3 |