Table 3.
Conserved motifs of the TNL subfamily in S pimpinellifolium.
| Domain | Motif Number | Motif | Width | E-Value | Motif Sequence |
|---|---|---|---|---|---|
| TIR | Motif01 | T-1 | 40 | 1.20E-236 | xkYDVFLSFRGEDTRxtFtxHLYxaLxnrGIxTFxDdkrL |
| Motif03 | T-2 | 29 | 2.00E-197 | AIeeSxxaxvIFSkNYAxSrWCLxELVkI | |
| Motif02 | T-3 | 29 | 7.70E-198 | qxViPvFYdVDPShVRxQxesfxeaFxkH | |
| Motif08 | T-4 | 21 | 9.30E-104 | VxrWRxALxxAAdlxGxDxxn | |
| NBS | Motif04 | P-loop | 30 | 2.40E-192 | dVRixGIwGxGGIGKTTiAkAxFdxlxxxF |
| Motif05 | Kinase-2/RNBS-B | 40 | 1.80E-246 | kKVLiVLDDvDhxdqLdyLagxxxWFGxGSRIIxTTRdKH | |
| Motif09 | RNBS-C | 26 | 1.10E-96 | AxxLFnxhAFkxxxPxxxFxxlsxeV | |
| Motif12 | GLPL | 15 | 7.90E-80 | VxhAxGLPLALKVlG | |
| Motif20 | RNBS-D | 22 | 1.50E-39 | sxLhkrxxxxWrxtvxxlKxxp | |
| Motif13 | TNBS-1 | 15 | 5.80E-68 | dqxiFLDIACFfrGk | |
| Motif18 | TNBS-2 | 29 | 2.90E-65 | VxqILesCdFgAexGlxVLIdkSLVfISx | |
| LRR | Motif07 | L-1 | 21 | 8.00E-120 | xnxixMHdLIqeMGxxiVrxe |
| Motif10 | L-2 | 29 | 6.90E-92 | gkxSRlWxxeDxxxVlxxntgTxavEgIw | |
| Motif17 | L-3 | 21 | 3.80E-58 | LPENWYVsDNFLGFAVCYSGn | |
| Motif14 | L-4 | 21 | 1.00E-84 | yLPnxLRWlxWxxyPlxSlPx | |
| Motif06 | L-5 | 29 | 5.40E-153 | TPDFsgmPnLExLxLxxCxnLxEVHxSlG | |
| Motif15 | L-6 | 29 | 4.00E-97 | PxSIcxLkxLxxLxxsxCxkLexlPexiG | |
| Motif16 | L-7 | 29 | 6.60E-90 | dxxxPxDigxLSsLxxLxLxgNNFxxLPx | |
| Motif19 | L-8 | 40 | 5.30E-52 | TqLPEFPxQLDTIxADWSNDxICNSLFQNISsfQHDISAS | |
| Motif11 | L-9 | 29 | 6.70E-83 | aIHFFLVPLAGLWdTSkANGkTPNDYglI |
Abbreviations: LRR, leucine-rich repeat; NBS, nucleotide-binding site; TIR, toll/interleukin-1 receptor.