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. 2020 Feb 24;12(4):3140–3155. doi: 10.18632/aging.102783

Table 2. The list of likely pathogenic and pathogenic mutations detected in the cohort.

Sample ID Gene Mutation type Description AF Degrees Public database or published paper
RS1829111TIS ATM frameshift variant p.L2081fs 78.90% Likely pathogenic N
RSI 829631HS ATM stop gained p.Y155* 43.90% Likely pathogenic N
RS1806623TIS ATM stop gained p.E277* 46.82% Pathogenic Y (clinvar)
RS1810742TIS BRCA1 splice region variant p.T1691K 57.66% Likely pathogenic Y (clinvar)
RSI 827051FFP BRCA1 splice region variant p.T1691K 72.22% Likely pathogenic Y (clinvar)
RS1828137FFP BRCA1 frameshift variant p.H318fs 60.59% Likely pathogenic Y (PMID: 28724667)
RS1834453TIS BRCA1 frameshift variant p.I1824fs 32.62% Pathogenic Y (PMID: 28724667)
RS1803594FFP BRCA1 splice region variant c.5074+3A>G 58.09% Pathogenic Y (clinvar)
RS1726576TIS BRCAl missense variant P-F1734L 80.27% Likely pathogenic Y (clinvar)
RS1725206FFP BRCA1 frameshift variant p.I1824fs 40.06% Pathogenic Y (PMID: 28724667)
RS1827494TIS BRCAl frameshift variant p.P930fs 61.94% Likely pathogenic Y (PMID: 28724667)
RS1829599FFP BRCAl frameshift variant p.Q1323fs 64.93% Pathogenic N
RSI 811823TIS BRCAl frameshift variant p.L1306fs 84.90% Pathogenic Y (PMID: 28724667)
RSI 804518FFP BRCAl splice donor variant c.134+1G>T 48.46% Pathogenic Y (clinvar)
RS1815241TIS BRCA2 frameshift variant p.A938fs 52.73% Pathogenic Y (clinvar)
RS1844984FFP BRCA2 splice acceptor variant c.-39-l_-39del 36.90% Pathogenic Y (clinvar)
RS1829456TIS BRCA2 stop gained p.Q1295* 55.38% Pathogenic Y (clinvar)
RS1803222TIS BRCA2 frameshift variant p.A2764fs 71.71% Pathogenic N
RS1821585FFP BRCA2 frameshift variant p.V726fs 51.09% Likely pathogenic N
RS1722724TIS BRCA2 stop gained p.W2626* 67.38% Pathogenic Y (clinvar)
RS1840694PLA BRCA2 stop gained p.Q1037* 49.37% Pathogenic Y (clinvar)
RSI 823761TIS BRCA2 stop gained p.S1882* 82.53% Pathogenic Y (clinvar)
RS1833574PLA BRCA2 stop gained P-Q1037* 48.98% Pathogenic Y (clinvar)
RS1841181FFP BRCA2 splice donor variant c.316+lG>A 59.00% Pathogenic Y (clinvar)
RS1723884TIS BRCA2 stop gained p.K944* 57.95% Pathogenic Y (clinvar)
RS1838903TIS BRCA2 frameshift variant p.T3033fs 57.11% Pathogenic Y (clinvar)
RS1826534FFP BRCA2 frameshift variant p.N957fs 57.89% Pathogenic N
RS1812099FFP BRCA2 stop gained p.Ql 129* 87.60% Pathogenic Y (clinvar)
RSI 800551FFP BRCA2 frameshift variant p.A938fs 54.00% Pathogenic Y (clinvar)
RS1813609FFP BRCA2 frameshift variant p.W1692fs 62.10% Likely pathogenic Y (PMID: 26689913, PMID: 25415331)
RS1801361TIS BRCA2 frameshift variant p.A938fs 56.82% Pathogenic Y (clinvar)
RS1813932FFP BRCA2 stop gained p.E7* 64.48% Pathogenic N
RS1840466TIS BRIP1 splice donor variant c.627+lG>A 64.39% Pathogenic Y (clinvar)
RS1809229FFP BRIP1 start lost p.Ml? 40.17% Pathogenic Y (clinvar)
RS1840704PLA BRIP1 stop gained P-R798* 48.41% Pathogenic Y (clinvar)
RS1828521TIS CDH1 missense variant p.T340A 45.90% Likely pathogenic Y (clinvar)
RS1829332TIS CDHl missense variant P-T340A 35.80% Likely pathogenic Y (clinvar)
RS1830223FFP CDH1 missense variant p.T340A 43.68% Likely pathogenic Y (clinvar)
RS1726142FFP CHEK2 stop gained p.R95* 73.50% Pathogenic Y (clinvar)
RSI 829637TIS CHEK2 missense variant p.H371Y 78.51% Likely pathogenic Y (clinvar)