Table 2. Genetic diversity indices of G. intestinalis and Blastocystis by department.
| Locus | Parameter | Bolívar | Casanare | Córdoba | Cauca | Total | |
|---|---|---|---|---|---|---|---|
| G. intestinalis | gdh | n | 11 | 7 | 4 | 8 | 30 |
| π | 0.08719 | 0.16324 | 0.31284 | 0.05862 | 0.18028 | ||
| Θ | 0.14248 | 0.20964 | 0.34426 | 0.0736 | 0.3224 | ||
| S | 95 | 121 | 141 | 47 | 202 | ||
| h | 11 | 7 | 4 | 4 | 24 | ||
| Hd | 0.891 | 1 | 1 | 0.75 | 0.977 | ||
| SD | 0.039 | 0.076 | 0.177 | 0.139 | 0.017 | ||
| tpi | n | 11 | 10 | 4 | ND | 25 | |
| π | 0.00689 | 0.04833 | 0.11351 | ND | 0.03922 | ||
| Θ | 0.01228 | 0.08307 | 0.12426 | ND | 0.07113 | ||
| S | 15 | 95 | 93 | ND | 105 | ||
| h | 5 | 9 | 4 | ND | 17 | ||
| Hd | 0.618 | 0.978 | 1 | ND | 0.903 | ||
| SD | 0.164 | 0.054 | 0.177 | ND | 0.054 | ||
| Blastocystis | 18s | n | 24 | 28 | 2 | 60 | 114 |
| π | 0.27703 | 0.14334 | 0.48703 | 0.08725 | 0.71859 | ||
| Θ | 0.35406 | 0.27501 | 0.48703 | 0.21444 | 0.56508 | ||
| S | 209 | 84 | 169 | 6 | 19 | ||
| h | 24 | 22 | 2 | 5 | 90 | ||
| Hd | 0.989 | 0.966 | 1 | 0.219 | 0.993 | ||
| SD | 0.012 | 0.024 | 0.5 | 0.07 | 0.03 |
Note:
n, number of sequences; π, nucleotide diversity; Θ, theta (per site) from eta; S, number of segregating sites; h, number of haplotypes; Hd, haplotype diversity; SD, standard deviation; ND, not determined.