Table 1. Known AMR genes present in the S. aureus pan-genome.

Antibiotic	Genes
ciprofloxacin	gyrA [21,22], gyrB [21,22], parC [21,22], parE [21,22], norA [23], norB [23], norC [23], sdrM [23], mdeA [23], qacA [23], mepA [23], mepR [23], mgrA [23], arlR [23], arlS [23]
clindamycin	ermA [24,25], ermC [24,25], lmrS [26], linA [24]
erythromycin	ermA [24,25], ermC [24,25], lmrS [26], msrA [27], mphC [24]
gentamicin	aph(3')-III [28,29], ant(4')-I [28], aac(6')-aph(2") [28,29], ant(6')-Ia [30]
tetracycline	tetK [31], tetM [31], tet38 [32], norB [23], mgrA [23]
trimethoprim	folA [33], dfrA [33], dfrG [34]
sulfamethoxazole	folP [33]