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. 2020 Mar 12;18:26. doi: 10.1186/s12915-020-0757-y

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© The Author(s). 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 4 — Evolutionary history of many microinversions differed from the consensus genome phylogeny; while genome-wide SNP panels showed uniform support for two separate Aaa/Aaf clades and Ae. mascarensis as an outgroup after 100 bootstrap replicates, phylogenies derived from the 1 MB around introgressed inversions (surrounding region showed ƒ_D > 1.5× IQ range and > 90% of local 200 Mb maximum) can illustrate introgression of haplotypes between diverged forms. Inversions 2qam and 3qau both show Ae. mascarensis haplotypes that cluster within the Aaa clade, indicating introgression from global Aaa populations into the local Ae. mascarensis populations