Table 3.
Primer sequences, genes for beta-lactamase and the expected amplicon sizes
Group | Gene name | Primer sequence (5′–3′) | Expected amplicon size (bp) |
---|---|---|---|
ESBLS genes | blaTEM | GTCGCCGCATACACTATTCTCA | 258 |
CGCTCGTCGTTTGGTATGG | |||
blaCTX-M | CGGGAGGCAGACTGGGTGT | 381 | |
TCGGCTCGGTACGGTCGA | |||
blaSHV | GCCTTGACCGCTGGGAAAC | 319 | |
GGCGTATCCCGCAGATAAAT | |||
Carbapenemase genes | blaVIM | GATGGTGTTTGGTCGCATA | 390 |
CGAATGCGCAGC | |||
blaOXA-1 | TTCTGTTGTTTGGGTTTCGC | 190 | |
ACGCAGGAATTGAATTTGTTC | |||
blaKPC-2 | GCTTCCCACTGTGCAGCTCATTC | 213 | |
CGCCCAACTCCTCAGCAACAATTG | |||
blaNDM-1 | GGTGCATGCCCGGTGAAATC | 660 | |
ATGCTGGCCTTGGGGAACG |