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. 2020 Mar 11;21(Suppl 2):82. doi: 10.1186/s12859-020-3349-5

Table 5.

Key indicators of ELMSI corresponding to different read lengths

Number of MSIs Read length Coverage Accuracy Recall Precision Gain MCC
20 100 30 × 0.31 0.45 0.5 0 -0.25
60 × 0.33 0.5 0.5 0 -0.5
100 × 0.31 0.45 0.5 0 -0.52
120 × 0.36 0.55 0.52 0.05 -0.46
150 30 × 0.31 0.45 0.5 0 -0.25
60 × 0.37 0.5 0.59 0.15 -0.45
100 × 0.46 0.6 0.6 0.3 -0.36
120 × 0.42 0.55 0.65 0.25 -0.40
200 30 × 0.5 0.65 0.68 0.35 -0.33
60 × 0.49 0.57 0.65 0.1 -0.55
100 × 0.48 0.7 0.61 0.25 -0.34
120 × 0.52 0.7 0.67 0.35 -0.32
250 30 × 0.6 0.75 0.75 0.5 -0.25
60 × 0.54 0.7 0.7 0.4 -0.3
100 × 0.55 0.75 0.69 0.2 -0.38
120 × 0.58 0.75 0.71 0.25 -0.34
50 100 30 × 0.43 0.6 0.6 0.2 -0.4
60 × 0.37 0.55 0.54 0.08 -0.46
100 × 0.45 0.63 0.61 0.23 -0.38
120 × 0.36 0.55 0.52 0.05 -0.46
150 30 × 0.51 0.68 0.63 0.35 -0.33
60 × 0.45 0.63 0.61 0.23 -0.38
100 × 0.48 0.58 0.62 0.05 -0.45
120 × 0.47 0.73 0.63 0.45 -0.28
200 30 × 0.51 0.7 0.65 0.45 -0.32
60 × 0.61 0.78 0.64 0.5 -0.24
100 × 0.52 0.63 0.67 0.15 -0.40
120 × 0.56 0.75 0.68 0.4 -0.28
250 30 × 0.53 0.7 0.68 0.38 -0.31
60 × 0.57 0.78 0.7 0.23 -0.36
100 × 0.61 0.7 0.67 0.35 -0.32
120 × 0.59 0.75 0.7 0.25 -0.33