Table 2.
Enzyme | Gene locus | Chr. Location | Length sequenced (bp) | Coding region | |||
---|---|---|---|---|---|---|---|
Total | CDS | Promoter | ENC | GC (GC3)a | |||
Cc‐Man‐S | Cc06_g04240 | 6 | 2,274 | 1,593 | 681 | 41.24 | 0.36 (0.41) |
Cc01_g05870 | 1 | 2,245 | 2,031 | 214 | 52.51 | 0.39 (0.43) | |
Cc06_g05120 | 6 | 2,076 | 1,602 | 474 | 39.11 | 0.35 (0.31) | |
Cc08_g06540 | 8 | 2,117 | 2,082 | 35 | 38.95 | 0.37 (0.30) | |
Cc10_g07720 | 10 | 2,127 | 2,062 | 65 | 67.21 | 0.39 (0.32) | |
Cc‐GMGT | Cc07_g07220 | 7 | 2,233 | 1,335 | 898 | 54.56 | 0.34 (0.40) |
Cc07_g07210 | 7 | 2,218 | 1,347 | 871 | 37.71 | 0.28 (0.32) | |
Cc00_g25840 | 0 | 2,120 | 1,311 | 809 | 39.93 | 0.30 (0.39) | |
Cc03_g01930 | 3 | 1,823 | 1,383 | 440 | 50.13 | 0.31 (0.34) | |
Cc‐alpha Gal | Cc02_g05490 | 2 | 2,157 | 1,275 | 882 | 58.24 | 0.41 (0.48) |
Cc11_g15950 | 11 | 2,118 | 1,182 | 936 | 54.79 | 0.53 (0.52) | |
Cc04_g14280 | 4 | 2,130 | 1,137 | 993 | 61.01 | 0.41 (0.37) | |
Cc11_g00330 | 11 | 1,754 | 1,311 | 443 | 57.20 | 0.41 (0.49) | |
Cc‐UG4E | Cc11_g04810 | 11 | 2,142 | 1,355 | 787 | 40.91 | 0.48 (0.57) |
Cc07_g03170 | 7 | 2,177 | 2,116 | 61 | 43.42 | 0.40 (0.53) | |
Cc00_g06000 | 0 | 1,928 | 1,350 | 578 | 38.33 | 0.38 (0.36) | |
Cc‐MGT | Cc05_g00320 | 5 | 2,128 | 1,086 | 1,042 | 36.47 | 0.44 (0.58) |
Cc02_g07370 | 2 | 1,736 | 1,086 | 650 | 41.31 | 0.37 (0.43) |
Abbreviation: ENC, effective number of codon.
Average for 23 C. canephora accessions, GC3, average GC content at the third‐codon positions of coding genes for all accessions