TABLE 2.
Statistically significant differential recoding sites.
Chr:position | Gene | AA change | Δ editing | Pval (MW) | Padj (BH) |
chr4:57976234* | IGFBP7 | K95R | –0.417 | 0.000015 | 0.000016 |
chr13:46090371 | COG3 | I635V | –0.536 | 0.000016 | 0.000017 |
chr19:7585273 | ZNF358 | K382R | –0.381 | 0.000016 | 0.000017 |
chr1:160302244* | COPA | I164V | –0.416 | 0.000017 | 0.000018 |
chr4:57976286* | IGFBP7 | R78G | –0.522 | 0.000019 | 0.000019 |
chrX:153579950* | FLNA | Q474R | –0.310 | 0.000027 | 0.000027 |
chr4:17805279 | DCAF16 | I162M | 0.059 | 0.000088 | 0.000088 |
chr8:103841636 | AZIN1 | S367G | –0.081 | 0.000218 | 0.004633 |
chr20:36147572* | BLCAP | Y2C | 0.090 | 0.000295 | 0.005015 |
chr20:36147563 | BLCAP | Q5R | 0.063 | 0.000178 | 0.005043 |
chr4:77979680 | CCNI | R61G | –0.100 | 0.000132 | 0.005610 |
chr20:36147533 | BLCAP | K15R | 0.029 | 0.000464 | 0.005634 |
chr19:14593605 | GIPC1 | T62A | –0.237 | 0.000458 | 0.006488 |
chr12:133682596 | ZNF140 | Y142H | 0.061 | 0.000998 | 0.010604 |
chr14:26917530 | NOVA1 | S363G | 0.099 | 0.000128 | 0.010880 |
chr3:9876560 | TTLL3 | K419R | 0.016 | 0.001442 | 0.011143 |
chr3:58141801* | FLNB | Q2103R | –0.228 | 0.001180 | 0.011144 |
chr5:156736808 | CYFIP2 | K124E | –0.007 | 0.001350 | 0.011475 |
chr15:75646086 | NEIL1 | K242R | 0.182 | 0.001673 | 0.011850 |
chr4:77977164 | CCNI | K123R | –0.009 | 0.002107 | 0.013777 |
chr1:12091858 | MIIP | S355G | 0.018 | 0.002867 | 0.017407 |
chr21:34922801* | SON | T422A | –0.146 | 0.003614 | 0.020479 |
chr3:58141791 | FLNB | M2100V | –0.116 | 0.004256 | 0.022610 |
chr18:32825609 | ZNF397 | K314E | 0.058 | 0.004582 | 0.022910 |
chr10:79397298 | KCNMA1 | S35G | –0.051 | 0.005179 | 0.024456 |
chr6:44120349* | TMEM63B | Q619R | –0.144 | 0.006899 | 0.030864 |
Per each position we report the target gene and amino-acid change induced by RNA editing, the difference between mean editing levels of groups, the Mann–Whitney p-value, and the adjusted p-value by Benjamin–Hochberg. Positive Δ values indicate higher editing in cerebellum than artery, while negative Δs are associated to lower editing in cerebellum than artery. Positions marked by * are differentially edited by also the Tran et al. statistical pipeline.