Table 1.
No. | Gene Name | ORF Length | Gene ID | A. thaliana Homologs | Abbr. Name | Identity% | No. | Gene Name | ORF Length | Gene ID | A. thaliana Homologs | Abbr. Name | Identity% |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CgbHLH2 | 1869 | Cg5g002660 | AT1G63650 | EGL3 | 52.09 | 65 | CgbHLH73.3 | 915 | Cg1g019630 | AT5G67110 | ALC | 26.42 |
2 | CgbHLH3 | 1512 | Cg5g034370 | AT4G16430 | JAM3 | 58.3 | 66 | CgbHLH74 | 1284 | Cg3g013130 | AT1G10120 | CIB4 | 49.3 |
3 | CgbHLH6 | 2064 | CgUng000770 | AT1G32640 | JAI1 | 61.74 | 67 | CgbHLH75.1 | 717 | Cg2g036150 | AT1G25330 | CES | 52.2 |
4 | CgbHLH8 | 2229 | Cg5g013200 | AT1G09530 | PIF3 | 44.38 | 68 | CgbHLH75.2 | 1095 | Cg6g019500 | AT1G25330 | CES | 39.9 |
5 | CgbHLH9 | 1632 | Cg7g012190 | AT2G43010 | PIF4 | 44.07 | 69 | CgbHLH77 | 1455 | Cg9g014180 | AT3G23690 | CIL2 | 47.21 |
6 | CgbHLH10 | 1071 | Cg9g023740 | AT2G31220 | – | 46.5 | 70 | CgbHLH79 | 840 | Cg5g004140 | AT5G62610 | – | 59.71 |
7 | CgbHLH12 | 1974 | Cg5g042050 | AT4G00480 | MYC1 | 49.49 | 71 | CgbHLH80 | 765 | Cg3g020720 | AT1G35460 | FBH1 | 63.68 |
8 | CgbHLH13 | 1482 | Cg5g040610 | AT1G01260 | JAM2 | 57.11 | 72 | CgbHLH82 | 1563 | Cg4g018170 | AT5G58010 | LRL3 | 43.38 |
9 | CgbHLH14.1 | 1551 | Cg5g040200 | AT4G00870 | – | 47.04 | 73 | CgbHLH83 | 888 | Cg6g018550 | AT1G66470 | RHD6 | 48.46 |
10 | CgbHLH14.2 | 1563 | Cg5g000450 | AT4G00870 | – | 37.07 | 74 | CgbHLH85.1 | 1089 | Cg8g003130 | AT4G33880 | RSL2 | 51.39 |
11 | CgbHLH15 | 1764 | Cg5g032930 | AT2G20180 | PIL5 | 46.61 | 75 | CgbHLH85.2 | 1104 | Cg3g012730 | AT4G33880 | RSL2 | 45.74 |
12 | CgbHLH16 | 1386 | Cg5g043840 | AT4G00050 | UNE10 | 59.43 | 76 | CgbHLH87.1 | 1296 | Cg1g009170 | AT3G21330 | – | 52.65 |
13 | CgbHLH18 | 783 | Cg5g017710 | AT2G22750 | – | 41.44 | 77 | CgbHLH87.2 | 513 | Cg6g009450 | AT3G21330 | – | 47.87 |
14 | CgbHLH21.1 | 1785 | Cg8g001500 | AT2G16910 | AMS | 48.72 | 78 | CgbHLH88 | 822 | Cg3g021250 | AT5G67060 | HEC1 | 50.93 |
15 | CgbHLH21.2 | 1419 | Cg7g019250 | AT2G16910 | AMS | 36.78 | 79 | CgbHLH91 | 1428 | Cg5g045050 | AT2G31210 | – | 45.32 |
16 | CgbHLH22 | 585 | Cg2g040910 | AT4G21330 | DYT1 | 43.92 | 80 | CgbHLH93.1 | 1065 | Cg1g007400 | AT5G65640 | NFL | 52.13 |
17 | CgbHLH25.1 | 570 | Cg8g002160 | AT4G37850 | – | 49.25 | 81 | CgbHLH93.2 | 1155 | Cg3g013530 | AT5G65640 | NFL | 46.11 |
18 | CgbHLH25.2 | 1017 | Cg1g007240 | AT4G37850 | – | 44.83 | 82 | CgbHLH94 | 957 | Cg1g008260 | AT1G22490 | – | 46.89 |
19 | CgbHLH25.3 | 426 | Cg8g002170 | AT4G37850 | – | 44.56 | 83 | CgbHLH95.1 | 939 | Cg8g004350 | AT1G49770 | RGE1 | 42.18 |
20 | CgbHLH25.4 | 1107 | Cg1g007260 | AT4G37850 | – | 44.04 | 84 | CgbHLH95.2 | 804 | Cg3g021160 | AT1G49770 | RGE1 | 41.02 |
21 | CgbHLH29.1 | 210 | Cg8g019060 | AT2G28160 | FIT | 64.41 | 85 | CgbHLH95.3 | 729 | Cg2g044520 | AT1G49770 | RGE1 | 24.66 |
22 | CgbHLH29.2 | 222 | Cg8g019160 | AT2G28160 | FIT | 61.9 | 86 | CgbHLH96.1 | 993 | Cg3g014510 | AT1G72210 | – | 56.62 |
23 | CgbHLH29.3 | 489 | Cg8g018990 | AT2G28160 | FIT | 52 | 87 | CgbHLH96.2 | 906 | Cg2g030740 | AT1G72210 | – | 51.72 |
24 | CgbHLH29.4 | 969 | Cg8g019240 | AT2G28160 | FIT | 51.16 | 88 | CgbHLH97 | 1287 | Cg9g012540 | AT3G24140 | FMA | 60.67 |
25 | CgbHLH29.5 | 501 | Cg8g019040 | AT2G28160 | FIT | 50.49 | 89 | CgbHLH98 | 966 | Cg9g028240 | AT5G53210 | SPCH | 61.29 |
26 | CgbHLH29.6 | 633 | Cg8g019200 | AT2G28160 | FIT | 49.54 | 90 | CgbHLH102.1 | 1029 | Cg7g015780 | AT1G69010 | BIM2 | 60.19 |
27 | CgbHLH29.7 | 237 | Cg8g019020 | AT2G28160 | FIT | 49.25 | 91 | CgbHLH102.2 | 1026 | Cg6g020770 | AT1G69010 | BIM2 | 44.37 |
28 | CgbHLH29.8 | 660 | Cg8g019140 | AT2G28160 | FIT | 48.15 | 92 | CgbHLH104 | 648 | Cg9g007860 | AT4G14410 | – | 64.62 |
29 | CgbHLH29.9 | 651 | Cg8g018940 | AT2G28160 | FIT | 47.27 | 93 | CgbHLH105.1 | 714 | Cg2g023210 | AT5G54680 | ILR3 | 73.16 |
30 | CgbHLH29.10 | 1416 | Cg8g019230 | AT2G28160 | FIT | 37.17 | 94 | CgbHLH105.2 | 711 | Cg2g017780 | AT5G54680 | ILR3 | 65.18 |
31 | CgbHLH29.11 | 903 | Cg8g018890 | AT2G28160 | FIT | 33.15 | 95 | CgbHLH105.3 | 711 | Cg2g040740 | AT5G54680 | ILR3 | 62.11 |
32 | CgbHLH30 | 798 | Cg2g043260 | AT1G68810 | ABS5 | 41.67 | 96 | CgbHLH107.1 | 717 | Cg6g017840 | AT3G56770 | – | 59.26 |
33 | CgbHLH31 | 753 | Cg7g020320 | AT1G59640 | ZCW32 | 51.95 | 97 | CgbHLH107.2 | 786 | Cg3g014080 | AT3G56770 | – | 37.04 |
34 | CgbHLH32 | 789 | Cg7g014890 | AT3G25710 | TMO5 | 58.65 | 98 | CgbHLH107.3 | 846 | Cg2g008600 | AT3G56770 | – | 35.87 |
35 | CgbHLH33.1 | 1659 | Cg7g011080 | AT1G12860 | ICE2 | 57.28 | 99 | CgbHLH110.1 | 1299 | Cg3g023160 | AT1G27660 | – | 51.35 |
36 | CgbHLH33.2 | 1443 | Cg2g009820 | AT1G12860 | ICE2 | 55.8 | 100 | CgbHLH110.2 | 1104 | CgUng019530 | AT1G27660 | – | 48.1 |
37 | CgbHLH35 | 747 | Cg4g021000 | AT5G57150 | – | 57.2 | 101 | CgbHLH112 | 1479 | Cg2g040950 | AT1G61660 | – | 44.04 |
38 | CgbHLH36.1 | 741 | Cg9g025850 | AT5G51780 | – | 53.85 | 102 | CgbHLH113 | 819 | Cg8g003580 | AT3G19500 | – | 45.71 |
39 | CgbHLH36.2 | 744 | Cg5g009400 | AT5G51780 | – | 42.77 | 103 | CgbHLH120 | 537 | Cg9g025860 | AT5G51790 | – | 47.46 |
40 | CgbHLH36.3 | 726 | Cg9g025870 | AT5G51780 | – | 38.69 | 104 | CgbHLH121 | 1029 | CgUng005820 | AT3G19860 | – | 61.39 |
41 | CgbHLH36.4 | 1122 | Cg3g014280 | AT5G51780 | – | 25.81 | 105 | CgbHLH122 | 1296 | Cg2g002540 | AT1G51140 | FBH3 | 45.14 |
42 | CgbHLH37 | 807 | Cg1g002590 | AT3G50330 | HEC2 | 53.88 | 106 | CgbHLH123 | 1377 | Cg2g022720 | AT3G20640 | – | 49.59 |
43 | CgbHLH39 | 762 | Cg9g016290 | AT3G56980 | ORG3 | 47.5 | 107 | CgbHLH128 | 1116 | Cg5g028960 | AT1G05805 | AKS2 | 55.06 |
44 | CgbHLH41 | 1599 | Cg4g008800 | AT5G56960 | – | 29.22 | 108 | CgbHLH130.1 | 2334 | Cg9g022410 | AT2G42280 | FBH4 | 57.14 |
45 | CgbHLH42 | 2073 | Cg5g035630 | AT4G09820 | TT8 | 56.51 | 109 | CgbHLH130.2 | 1287 | Cg7g023040 | AT2G42280 | FBH4 | 45.99 |
46 | CgbHLH43 | 462 | Cg1g025450 | AT5G09750 | HEC3 | 66.92 | 110 | CgbHLH137.1 | 1116 | Cg7g010980 | AT5G50915 | – | 45.96 |
47 | CgbHLH44 | 1200 | Cg1g004400 | AT1G18400 | BEE1 | 21.48 | 111 | CgbHLH137.2 | 837 | Cg7g022310 | AT5G50915 | – | 43.89 |
48 | CgbHLH45 | 555 | Cg9g004620 | AT3G06120 | MUTE | 65.03 | 112 | CgbHLH138 | 1542 | Cg1g007950 | AT2G31215 | – | 28 |
49 | CgbHLH46 | 1761 | Cg5g012000 | AT5G08130 | BIM1 | 53.08 | 113 | CgbHLH144 | 609 | Cg1g004390 | AT1G29950 | SACL3 | 23.28 |
50 | CgbHLH47 | 729 | Cg5g003170 | AT3G47640 | PYE | 51.79 | 114 | CgbHLH153 | 435 | Cg5g026370 | AT1G05710 | – | 66.42 |
51 | CgbHLH48 | 1227 | Cg9g022350 | AT2G42300 | – | 59.32 | 115 | CgbHLH154.1 | 933 | Cg1g012580 | AT2G31730 | – | 47 |
52 | CgbHLH49 | 1680 | Cg7g015600 | AT1G68920 | CIB1 | 54.17 | 116 | CgbHLH154.2 | 735 | Cg7g004740 | AT2G31730 | – | 36.36 |
53 | CgbHLH50 | 798 | Cg5g022610 | AT1G73830 | BEE3 | 55.27 | 117 | CgbHLH154.3 | 1107 | Cg5g035790 | AT2G31730 | – | 24.68 |
54 | CgbHLH51 | 843 | Cg7g002190 | AT2G40200 | – | 42.34 | 118 | CgbHLH155 | 2250 | Cg5g034200 | AT2G31280 | LHL2 | 47.44 |
55 | CgbHLH52 | 939 | Cg2g038660 | AT1G30670 | – | 42.51 | 119 | CgbHLH160 | 999 | Cg3g004340 | AT1G71200 | CITF1 | 40.58 |
56 | CgbHLH57 | 1299 | Cg5g039930 | AT4G01460 | – | 51.96 | 120 | CgbHLH162.1 | 570 | Cg2g042210 | AT4G20970 | – | 42.93 |
57 | CgbHLH62 | 1665 | Cg6g008950 | AT3G07340 | CIB3 | 53.27 | 121 | CgbHLH162.2 | 345 | Cg2g005390 | AT4G20970 | – | 38.16 |
58 | CgbHLH63 | 1215 | Cg8g007040 | AT4G34530 | CIB1 | 46.28 | 122 | CgbHLH162.3 | 279 | Cg2g005350 | AT4G20970 | – | 37.84 |
59 | CgbHLH68 | 1023 | Cg1g014350 | AT4G29100 | – | 51.43 | 123 | CgbHLH162.4 | 549 | Cg5g004810 | AT4G20970 | – | 35.23 |
60 | CgbHLH69.1 | 633 | Cg3g010300 | AT4G30980 | LRL2 | 55.43 | 124 | CgbHLH162.5 | 498 | Cg2g005320 | AT4G20970 | – | 33.54 |
61 | CgbHLH69.2 | 1044 | Cg4g024560 | AT4G30980 | LRL2 | 52.04 | 125 | CgbHLH162.6 | 462 | Cg2g005400 | AT4G20970 | – | 33.56 |
62 | CgbHLH72 | 1155 | Cg5g010830 | AT5G61270 | PIF7 | 47.52 | 126 | CgbHLH162.7 | 666 | Cg2g015830 | AT4G20970 | – | 31.28 |
63 | CgbHLH73.1 | 1233 | Cg1g005520 | AT5G67110 | ALC | 49.15 | 127 | CgbHLH162.8 | 498 | Cg2g005380 | AT4G20970 | – | 31.06 |
64 | CgbHLH73.2 | 4401 | Cg5g039380 | AT5G67110 | ALC | 29.05 | 128 | CgbHLH162.9 | 420 | Cg2g005340 | AT4G20970 | – | 33.33 |
Abbreviation (Abbr.) names are the known gene names in A. thaliana, and their full names are shown in abbreviations list