| (A) Bud stage periphery |
| GO:0016579 |
Protein deubiquitination |
24 |
16 |
8.70 |
0.002 |
| GO:0048825 |
Cotyledon development |
21 |
12 |
7.61 |
0.005 |
| GO:0015846 |
Polyamine transport |
5 |
5 |
1.81 |
0.006 |
| GO:0034314 |
Arp2/3 complex-mediated actin nucleation |
5 |
5 |
1.81 |
0.006 |
| GO:0006020 |
Inositol metabolic process |
12 |
7 |
4.35 |
0.011 |
| GO:0010229 |
Inflorescence development |
9 |
7 |
3.26 |
0.014 |
| GO:0009744 |
Response to sucrose |
31 |
16 |
11.24 |
0.021 |
| GO:1903338 |
Regulation of cell wall organization or biogenesis |
11 |
7 |
3.99 |
0.026 |
| GO:0006809 |
Nitric oxide biosynthetic process |
6 |
5 |
2.18 |
0.026 |
| GO:0009773 |
Photosynthetic electron transport in photosystem I |
8 |
6 |
2.90 |
0.030 |
| GO:0034613 |
Cellular protein localization |
183 |
75 |
66.34 |
0.031 |
| GO:0006004 |
Fucose metabolic process |
12 |
8 |
4.35 |
0.032 |
| GO:0009926 |
Auxin polar transport |
42 |
22 |
15.23 |
0.037 |
| GO:0010090 |
Trichome morphogenesis |
38 |
19 |
13.78 |
0.041 |
| GO:0009414 |
Response to water deprivation |
182 |
69 |
65.98 |
0.045 |
| GO:0009873 |
Ethylene-activated signaling pathway |
78 |
38 |
28.28 |
0.046 |
| GO:0007166 |
Cell surface receptor signaling pathway |
93 |
42 |
33.71 |
0.046 |
| GO:0006163 |
Purine nucleotide metabolic process |
96 |
38 |
34.80 |
0.047 |
| GO:0035195 |
Gene silencing by miRNA |
15 |
7 |
5.44 |
0.048 |
| GO:0016236 |
Macroautophagy |
21 |
9 |
7.61 |
0.048 |
| GO:0055083 |
Monovalent inorganic anion homeostasis |
13 |
5 |
4.71 |
0.048 |
| GO:0051338 |
Regulation of transferase activity |
38 |
13 |
13.78 |
0.048 |
| GO:0006473 |
Protein acetylation |
23 |
7 |
8.34 |
0.048 |
| (B) D stage periphery |
| GO:0045490 |
Pectin catabolic process |
20 |
19 |
12.88 |
0.002 |
| GO:0007166 |
Cell surface receptor signaling pathway |
93 |
71 |
59.90 |
0.006 |
| GO:0000398 |
mRNA splicing, via spliceosome |
46 |
38 |
29.63 |
0.007 |
| GO:0009740 |
Gibberellic acid mediated signaling pathway |
31 |
24 |
19.97 |
0.015 |
| GO:0006310 |
DNA recombination |
54 |
41 |
34.78 |
0.015 |
| GO:0009909 |
Regulation of flower development |
80 |
57 |
51.53 |
0.017 |
| GO:0009058 |
Biosynthetic process |
2,121 |
1,360 |
1,366.19 |
0.019 |
| GO:0042545 |
Cell wall modification |
34 |
26 |
21.90 |
0.021 |
| GO:0001708 |
Cell fate specification |
13 |
12 |
8.37 |
0.027 |
| GO:0042538 |
Hyperosmotic salinity response |
25 |
21 |
16.10 |
0.027 |
| GO:0002181 |
Cytoplasmic translation |
21 |
18 |
13.53 |
0.029 |
| GO:0006897 |
Endocytosis |
40 |
27 |
25.76 |
0.029 |
| GO:0010197 |
Polar nucleus fusion |
20 |
17 |
12.88 |
0.039 |
| GO:0071702 |
Organic substance transport |
492 |
319 |
316.91 |
0.046 |
| GO:0006949 |
Syncytium formation |
7 |
7 |
4.51 |
0.046 |
| GO:0008295 |
Spermidine biosynthetic process |
7 |
7 |
4.51 |
0.046 |
| GO:0009963 |
Positive regulation of flavonoid biosynthetic process |
7 |
7 |
4.51 |
0.046 |
