Table 5.

Genotype phenotype association of selected SNVs in the LCORL gene.

Chr.	Position	cDNA Variant XM_018049322.1	Protein Variant XP_017904811.1	Alternative Allele Frequency in Breeds with the Selection Signature a	Alternative Allele Frequency in Breeds without the Selection Signature b	p-Value
6	37,925,990	c.3480C>T	p.=	0.05	0.26	3.0 × 10−04
6	37,926,110	c.3360G>A	p.=	0.93	0.35	2.1 × 10−13
6	37,926,957	c.2513A>G	p.His838Arg	1.00	1.00	NA
6	37,927,785	c.1685A>G	p.Asn562Ser	0.01	0.26	1.8 × 10−07
6	37,928,172	c.1298A>G	p.Tyr433Cys	0.96	0.53	3.9 × 10−10
6	37,928,645	c.828_829insA	p.Ser277Ilefs*38	0.95	0.35	8.0 × 10−15
6	37,932,928	c.777-4235T>C	intronic/3′-UTR of short isoform	0.01	0.09	1.0 × 10−02

^a BAR, BEE, DDP, KAM; NAC, ^b ANG, PAH, TED.